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. 2013 Sep 21;14:635. doi: 10.1186/1471-2164-14-635

Table 3.

Down-regulated gene functions in cell cultures at 12th passage as compared to cells at 4th passage

Class Gene Description Functions Ref
TP53 NODE
TP53
Major tumor protein suppressor
Cell cycle; Apoptosis; Senescence
[41,42]
UBE2D3
Member of E2 ubiquitin conjugating enzyme family
Protein degradation machinery
[43]
MAP2K3
Protein kinase activated by environmental stress
Gene expression regulation; Mitosis; Cellular differentiation; Cellular proliferation; Apoptosis; Senescence
[44]
ZHX1
Zing finger and homeoboxes gene family
Maintenance of TP53 gene silencing
[45]
XPO1
Exportin 1
Protein trafficking; Localization of cyclin b; Localization of MPAK; Nuclear export of TP53
[46]
PIN1
Phosphorylation-dependent prolyne isomerase
Cellular differentiation; Cellular proliferation; Immune response; Mitosis
[47,48]
CDC27
Component of anaphase promoting complex
Mitosis; Ubiquitination
[49]
ANAPC2
Anaphase promoting complex
Cell cycle control; Ubiquitination
[50]
Cell cycle regulation and differentiation
TYMS
Thymidylate syntase
DNA replication and repair; Mitosis
[51]
FGFR3
Fibroblast growth factor receptor 3
Mitosis; MSCs differentiation
[52,53]
NCAPD2
Subunit of condensin I
Mitosis; Proliferation
[54,55]
MITF
Transcription factor
Cell cycle regulation; Gene expression; Differentiation
[56-58]
Oxidative stress response
RPS3
Ribosomal protein (40s subunit)
DNA damage repair; Kinase activity on NFkB complex
[59]
NFE2L2
Human basic leucine zipper transcription factor
Oxidative stress response
[60]
HSP1
Heat-shock protein 1
Protein folding
[61-63]
NFkB signalling
IKBKG
Regulatory subunit of IKK complex
NFkB activation
[64]
MYL5
Myosin light chain
NFkB activation
[65,66]
Apoptosis
SLC6A4
Membrane serotonin transporter
Apoptosis
[67]
Histonic modification HAT1
Histone acetyltransferase B
Histone acetylation; Aging; Cellular differentiation
[68]
HIST1H3C Member of Histone H3 family Transcriptional regulation; Cellular differentiation [69]