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. 2002 Feb 8;70(3):635–651. doi: 10.1086/338999

Table 1.

Primers for Amplification, Sequencing, and RFLP Analyses[Note]

Primer Pair Locations in CRS AnnealingTemperature(°C) Polymorphisms at/in
L29/H408 8–29/429–408 54 HVS-II
L394/H902 375–394/922–902 60 +663HaeIII (663)
L2796/H3274 2777–2796/3293–3274 57 3010, 3206
L3179/H3674 3160–3179/3693–3674 59 +3391HaeIII (3394)
L4499/H5099 4480–4499/5118–5099 60 +4831HhaI (4833), 4715
L4887/H5442 4866–4887/5461–5442 56 −5176 AluI (5178A), 5231, 5417
L7356/H7805 7337–7356/7824–7805 57 −7598HhaI (7598, 7600)
L8215/H8297 8196–8215/8316–8297 57 9-bp deletion
L9794/H10164 9774–9794/10181–10164 60 +9824 HinfI (9824)
L10170/H10660 10147–10170/10679–10660 59 10171–10659
L11338/H11944 11319–11338/11963–11944 53 11719
L12334/H12878 12315–12334/12897–12878 57 12705, 12358, 12372
L14054/H14591 14035–14054/14610–14591 57 14178, 14308, 14318, 14470
L14575/H15086 14556–14575/15105–15086 57 14766
L15391/H16048 15372–15391/16067–16048 58 15487T, 15784
L15996/H16498 15975–15996/16517–16498 60 HVS-I

Note.— PCR conditions were 94°C for 2 min, for denaturation; 94°C for 40 s; annealing temperature shown for 1 min, for amplification; and 72 °C for 1 min, for 35–40 cycles; incubation at 72°C for 5 min.