Table 1. Summary of Next Generation Sequencing (NGS) results.
Lines | Chemistry | Sequenced Reads | Total Num. of Bases | Avg. Length* | SD Length | Avg. Q-score | SD Q-score |
---|---|---|---|---|---|---|---|
DH12075 | 454 | 1,289,496 | 450,850,003 | 350 | 131.6 | 33.1 | 8.4 |
PSA12 | 454 | 826,680 | 289,078,010 | 350 | 101.1 | 32.6 | 8.5 |
Express | 454 | 827,074 | 313,062,567 | 379 | 105.4 | 31.4 | 8.4 |
V8 | 454 | 711,244 | 261,475,787 | 368 | 121.5 | 33.7 | 8.2 |
Tapidor | 454 | 778,116 | 257,650,369 | 331 | 95.1 | 31.6 | 8.5 |
Ningyou-7 | 454 | 803,553 | 288,413,071 | 359 | 112.8 | 33.2 | 7.9 |
Rainbow | 454 | 742,283 | 248,197,873 | 334 | 129.9 | 33.7 | 8.1 |
YN-429 | 454 | 735,005 | 254,920,458 | 347 | 101.3 | 32.4 | 8.5 |
CGNA1 | 454 | 742,361 | 267963689 | 364 | 118.7 | 33.1 | 8.4 |
CGNA2 | 454 | 717,016 | 270,568,629 | 374 | 117.6 | 33.3 | 8.3 |
DH12075 | Illumina | 167,215,495 | 8,225,138,523 | 49 | - | 40 | 2.3 |
Express | Illumina | 184,559,482 | 10,908,314,681 | 59 | - | 42 | 2.1 |
Abbreviations: Num.=Number; Avg. = Average; SD = Standard deviation; Q-score = Quality.
* Length in base pairs (bp).