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. 2013 Dec 4;4:416. doi: 10.3389/fimmu.2013.00416

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Copyright © 2013 Whelan, Yap, Surette, Golding and Bowdish.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Using the UCSC Genome Browser to search for single-nucleotide polymorphisms (SNPs) in SCARA3. This browser contains multiple “tracks,” including the location of SNPs across the length of a protein. Here we show the output from inputting the NCBI RefSeq for SCARA3 isoform (A). Further options to hide or show more annotation tracks are available directly below the graphical output. Under the “Variation and Repeats” tab, selecting “pack” under the “Common SNPs” option updates the output to include a full display of SNPs represented by their refSNP cluster ID numbers [(B), circled]. Clicking on any of the refSNP cluster IDs leads to a link displaying further information regarding the SNP as well as a link to NCBI’s dbSNP database.