Table 1.
Sequence divergence between Pokey elements from the Daphnia genome
| Lineage | PokeyA | PokeyB | mPok1 | mPok2a | mPok2b |
|---|---|---|---|---|---|
|
PokeyA |
0.059 |
0.399 |
|
|
|
|
PokeyB |
|
0.050 |
|
|
|
|
mPok1 |
|
|
0.032 |
|
|
|
mPok2a |
|
|
0.249 |
0.022 |
|
| mPok2b | 0.323 | 0.200 | 0.204 |
Estimates were calculated using the Kimura 2-parameter and pairwise deletion options in MEGA4. Estimates are based on separate alignments of PokeyA and PokeyB elements (28 sequences) and of mPok (61 sequences). mPok, Pokey-derived miniature inverted repeat transposable element.