Table 3.
Cause-specific differences in telomeric gene expression between cirrhotic/fibrotic and HCC tissue samples
| |
HBV |
HCV |
Alcohol |
|
|
||||
|---|---|---|---|---|---|---|---|---|---|
| Cirrhotic and/or Fibrotic (n = 8) | HCC (n = 10) | p | Cirrhotic and/or Fibrotic (n = 9) | HCC (n = 10) | p | Cirrhotic and/or Fibrotic (n = 10) | HCC (n = 10) | p | |
|
Shelterin | |||||||||
|
POT1 |
0.0000 |
0.0000 |
ns |
0.0125 |
0.0203 |
ns |
0.0090 |
0.0060 |
ns |
|
PTOP |
0.0000 |
0.0000 |
ns |
0.0037 |
0.0064 |
ns |
0.0055 |
0.0071 |
ns |
|
RAP1 |
0.0016 |
0.0000 |
ns |
0.4210 |
0.5059 |
ns |
0.4091 |
0.2538 |
ns |
|
TIN2 |
0.0018 |
0.0033 |
ns |
0.0510 |
0.0581 |
ns |
0.0804 |
0.0876 |
ns |
|
TRF1 |
0.0117 |
0.0209 |
ns |
0.2271 |
0.1626 |
ns |
0.2488 |
0.2886 |
ns |
|
TRF2 |
0.0000 |
0.0000 |
ns |
0.0061 |
0.0015 |
ns |
0.0012 |
0.0012 |
ns |
|
Non Shelterin | |||||||||
|
HMRE11A |
0.0006 |
0.0000 |
ns |
0.0627 |
0.0811 |
ns |
0.0764 |
0.0536 |
ns |
|
HMRE11B |
0.0008 |
0.0000 |
ns |
0.0492 |
0.0508 |
ns |
0.0886 |
0.0850 |
ns |
|
Ku70 |
0.0045 |
0.0024 |
ns |
0.1704 |
0.2418 |
ns |
0.1825 |
0.1645 |
ns |
|
Ku80 |
0.0033 |
0.0015 |
ns |
0.1209 |
0.1494 |
ns |
0.1316 |
0.0853 |
ns |
|
NBS1 |
0.0002 |
0.0024 |
ns |
0.0304 |
0.0317 |
ns |
0.0403 |
0.0501 |
ns |
|
RAD50 |
0.0002 |
0.0000 |
ns |
0.0091 |
0.0118 |
ns |
0.0108 |
0.0101 |
ns |
|
TANK1 |
0.0005 |
0.0000 |
ns |
0.0788 |
0.0761 |
ns |
0.0945 |
0.0869 |
ns |
|
TANK2 |
0.0000 |
0.0006 |
ns |
0.0188 |
0.0255 |
ns |
0.0127 |
0.0171 |
ns |
| Pinx1 | 0.0001 | 0.0049 | ns (0.054) | 0.0083 | 0.0107 | ns | 0.0219 | 0.0165 | ns |