Table 1.
Genetic differentiation between populations
| Locus | Populations | FST | P (FST) | Dxy | Da | Ss | Sf | S1 | S2 |
|---|---|---|---|---|---|---|---|---|---|
|
Timeless |
Florianópolis X Itatiaia |
0.1838 (0.2661) |
0.000 (0.000) |
0.03073 (0.02763) |
0.00564 (0.00735) |
19 (02) |
00 (00) |
44 (19) |
11 (03) |
| |
Florianópolis X Itatiaia A |
0.3154 (0.2876) |
0.000 (0.000) |
0.03058 (0.02813) |
0.01116 (0.00809) |
07 (01) |
02 (00) |
43 (20) |
03 (01) |
| |
Florianópolis X Itatiaia B |
0.1892 (0.3000) |
0.000 (0.000) |
0.02859 (0.02433) |
0.00646 (0.00730) |
09 (01) |
00 (00) |
40 (20) |
09 (00) |
| |
Itatiaia A X Itatiaia B |
0.3418 (0.2081) |
0.0000 (0.0300) |
0.0223 (0.0120) |
0.0076 (0.0025) |
05 (01) |
02 (00) |
05 (04) |
13 (03) |
|
Clock |
Florianópolis X Itatiaia |
0.6707 (0.6340) |
0.000 (0.000) |
0.05159 (0.05930) |
0.03460 (0.03760) |
00 (00) |
01 (01) |
06 (06) |
15 (14) |
| |
Florianópolis X Itatiaia A |
0.7325 (0.7207) |
0.000 (0.000) |
0.05065 (0.05879) |
0.03710 (0.04237) |
00 (00) |
04 (04) |
07 (07) |
06 (05) |
| |
Florianópolis X Itatiaia B |
0.5735 (0.6926) |
0.000 (0.000) |
0.05463 (0.06270) |
0.03133 (0.04343) |
00 (00) |
02 (04) |
06 (07) |
11 (04) |
| |
Itatiaia A X Itatiaia B |
0.1783 (0.0838) |
0.0000 (0.1610) |
0.0282 (0.0308) |
0.0050 (0.0030) |
03 (04) |
00 (00) |
03 (03) |
14 (13) |
|
Cycle |
Florianópolis X Itatiaia |
0.2845 (0.1765) |
0.000 (0.000) |
0.03575 (0.04093) |
0.01017 (0.00723) |
10 (06) |
00 (00) |
12 (07) |
09 (02) |
| |
Florianópolis X Itatiaia A |
0.3510 (0.2236) |
0.000 (0.000) |
0.03600 (0.04284) |
0.01264 (0.00958) |
06 (04) |
00 (00) |
16 (09) |
04 (02) |
| |
Florianópolis X Itatiaia B |
0.2127 (0.0863) |
0.000 (0.029) |
0.03278 (0.03550) |
0.00697 (0.00307) |
08 (04) |
00 (00) |
14 (09) |
04 (00) |
| |
Itatiaia A X Itatiaia B |
0.1523 (0.1524) |
0.0200 (0.1020) |
0.0249 (0.0281) |
0.0038 (0.0043) |
05 (03) |
00 (00) |
05 (02) |
07 (06) |
|
Rp49 |
Florianópolis X Itatiaia |
0.1667 (0.1303) |
0.000 (0.000) |
0.01433 (0.01155) |
0.00239 (0.00151) |
02 (01) |
00 (00) |
09 (09) |
14 (11) |
| |
Florianópolis X Itatiaia A |
0.2985 (0.2228) |
0.000 (0.000) |
0.01147 (0.00860) |
0.00342 (0.00192) |
02 (01) |
00 (00) |
09 (09) |
03 (02) |
| |
Florianópolis X Itatiaia B |
0.3743 (0.1978) |
0.000 (0.000) |
0.01774 (0.01453) |
0.00664 (0.00288) |
00 (00) |
01 (00) |
11 (10) |
08 (07) |
| |
Itatiaia A X Itatiaia B |
0.4784 (0.4865) |
0.0000 (0.0000) |
0.0204 (0.0196) |
0.0098 (0.0096) |
00 (00) |
01 (01) |
05 (05) |
08 (08) |
|
RpS2 |
Florianópolis X Itatiaia |
0.2631 (0.2647) |
0.000 (0.000) |
0.02045 (0.02005) |
0.00538 (0.00531) |
01 (00) |
00 (00) |
17 (15) |
13 (11) |
| |
Florianópolis X Itatiaia A |
0.2961 (0.2539) |
0.000 (0.000) |
0.02066 (0.0199) |
0.00612 (0.0050) |
00 (00) |
00 (00) |
18 (15) |
09 (08) |
| |
Florianópolis X Itatiaia B |
0.4212 (0.4880) |
0.000 (0.000) |
0.01924 (0.0201) |
0.00811 (0.0098) |
01 (00) |
00 (00) |
17 (15) |
03 (03) |
| |
Itatiaia A X Itatiaia B |
0.4494 (0.4730) |
0.0000 (0.000) |
0.0153 (0.0152) |
0.0069 (0.00723) |
01 (01) |
00 (00) |
08 (07) |
03 (02) |
|
RpS29 |
Florianópolis X Itatiaia |
0.7103 (0.7436) |
0.000 (0.000) |
0.05295 (0.07813) |
0.03771 (0.05809) |
01 (00) |
05 (04) |
12 (11) |
24 (16) |
| |
Florianópolis X Itatiaia A |
0.7624 (0.7880) |
0.000 (0.000) |
0.0545 (0.0830) |
0.0415 (0.0654) |
01 (00) |
05 (04) |
13 (12) |
10 (07) |
| |
Florianópolis X Itatiaia B |
0.7363 (0.7536) |
0.000 (0.000) |
0.0536 (0.0758) |
0.0395 (0.0571) |
01 (00) |
04 (03) |
13 (12) |
14 (09) |
| Itatiaia A X Itatiaia B | 0.1819 (0.1675) | 0.0000 (0.0110) | 0.0216 (0.0208) | 0.0039 (0.0035) | 06 (02) | 00 (00) | 05 (03) | 09 (10) |
FST, pair-wise estimates of population differentiation. P-value, significance of FST values (evaluated by 1,000 random permutations). Dxy and Da, average number of nucleotide substitutions per site and the number of net nucleotide substitutions per site between species, respectively [30]. S1, number of polymorphic sites exclusive to Florianópolis. S2, number of polymorphic sites exclusive to Itaparica. Ss and Sf, number of shared polymorphisms and number of fixed differences between the two species, respectively. Numbers in parentheses are related to the non-recombining block (NR) for each locus.