Table 2.
Supermatrix details
| Region | Genome | Genera | Species | Aligned length1 | Variable characters | % | PI characters | % | PI of combined matrix (%) | Missing data (%) | Taxon coverage density |
|---|---|---|---|---|---|---|---|---|---|---|---|
|
ITS |
Nuclear ribosomal |
51 |
765 |
585 |
461 |
78.8 |
345 |
59.0 |
10.6 |
28.8 |
0.71 |
|
matK |
Plastid |
44 |
287 |
1027 |
419 |
40.8 |
262 |
25.5 |
8.1 |
73.3 |
0.27 |
|
ndhF |
Plastid |
90 |
472 |
2109 |
960 |
45.5 |
670 |
31.8 |
20.6 |
56.1 |
0.44 |
|
psbA-trnH |
Plastid |
30 |
223 |
698 |
340 |
48.7 |
227 |
32.5 |
7.0 |
79.3 |
0.21 |
|
trnS-G |
Plastid |
15 |
246 |
1329 |
694 |
52.2 |
439 |
33.0 |
13.5 |
77.1 |
0.23 |
|
trnL-F |
Plastid |
90 |
707 |
905 |
353 |
39.0 |
206 |
22.8 |
6.3 |
34.2 |
0.66 |
|
waxy |
Nuclear |
41 |
708 |
2085 |
1349 |
64.7 |
1104 |
52.9 |
33.9 |
34.1 |
0.66 |
| Total | 90 | 1075 | 8738 | 4576 | 52.4 | 3253 | 37.2 | 100 | 54.7 | 0.45 |
List of the seven regions used for building the Solanaceae mega-phylogeny, showing level of sampling at specific and generic levels, aligned length, and proportions of parsimony informative (PI) and variable sites per region. Values have been calculated without outgroups.
1ingroup only, excluded regions omitted.