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. 2013 Sep 27;44(1):84. doi: 10.1186/1297-9716-44-84

Table 2.

Ranavirus sequence identity of the analyzed partial sequences of the MCP gene (502 nt) in %

  ASRV DGRV ACRV IIRV PVRV FV3 SSTIV CH8/96 ESV/ECV RTV TRV
ASRV
  
 98.0
 99.6
 96.4
 98.0
 99.6
 99.4
 98.2
 96.4
 98.2
 98
DGRV
 98.8
  
 98.4
 96.0
 97.6
 98.4
 98.6
 97.8
 96
 99.0
 97.6
ACRV
 100
 98.8
  
 96.8
 98.4
 100
 99.8
 98.6
 96.8
 98.6
 98.4
IIRV
 95.8
 96.4
 95.8
  
 96.8
 96.8
 97.0
 98.2
 100
 96.2
 96.8
PVRV
 98.2
 98.2
 98.2
 95.2
  
 98.4
 98.6
 97.8
 96.8
 97.8
 100
FV3
 100
 98.8
 100
 95.8
 98.2
  
 99.8
 98.6
 96.8
 98.6
 98.4
SSTIV
 99.4
 99.4
 99.4
 96.4
 98.8
 99.4
  
 98.8
 97.0
 98.8
 98.6
CH8/96
 97.6
 97.6
 97.6
 98.2
 97.0
 97.6
 98.2
  
 98.2
 98. 0
 97.8
ESV/ECV
 95.8
 96.4
 95.8
 100
 95.2
 95.8
 96.4
 98.2
  
 96.2
 96.8
RTV
 98.8
 100
 98.8
 96.4
 98.2
 98.8
 99.4
 97.6
 96.4
  
 97.8
TRV 98.2 98.2 98.2 95.2 100 98.2 98.8 97.0 95.2 98.2  

The five different lizard ranaviruses detected in this study are presented in comparison to other ranaviruses from amphians, reptiles and fish. The upper diagonal shows the values for the nucleotide sequence identity, the amino acid identity values are provided in the lower diagonal. Closest identities are highlighted in bold.

ASRV = Anolis sagrei ranavirus, DGRV = Dopasia gracilis ranavirus, ACRV = Anolis carolinensis ranavirus, IIRV = Iguana iguana ranavirus, PVRV = Pogona vitticeps ranavirus, FV3 = Frog virus 3 [GenBank:AY548484], SSTIV = Soft-shelled turtle iridovirus [GenBank:EU627010], CH8/96 = Testudo hermanni ranavirus [GenBank:AF114154], ESV = European sheatfish virus [GenBank:JQ724856], ECV = European catfish virus [GenBank:FJ358608], RTV = Rana tigrina ranavirus [GenBank:AY033630], TRV = Tortoise ranaviruses (= isolates from Testudo marginata (CU60/09), Testudo hermanni (5187/07) and Testudo kleinmanni (882/96) [9]).