Table 3.
Sample Contrasta | FST | Snnb | P |
All (13) | .159 | .190 | .0001 |
Among Africans (8) | .021 | .228 | .0001 |
Among African regions (3) | .000 | .472 | .1710 |
Among all regions (4): | .128 | .508 | .0001 |
West vs. East Africans | .000 | .626 | .1320 |
West vs. South Africans | .000 | .685 | .3180 |
West vs. non-Africans | .151 | .793 | .0001 |
East vs. South Africans | .000 | .461 | .8040 |
East vs. non-Africans | .131 | .757 | .0001 |
South vs. non-Africans | .160 | .804 | .0001 |
Among East Africans (3) | .022 | .418 | .0840 |
Among West Africans (4) | .030 | .415 | .0001 |
Among non-Africans (5) | .107 | .212 | .1930 |
Africans vs. non-Africans (2) | .127 | .805 | .0001 |
Number of population samples in contrast is given in parentheses. “African regions” denotes the West, East, and South African groups; “all regions” denotes the three African groups and the non-African sample. Only B alleles were included (see the “Results” section).
Hudson's (2000) Snn statistic. Significance was assessed by permutation tests (P<.001 [in boldface italics]; see the “Subjects and Methods” section).