Table 1.
Primer |
Annealing Temperaturea(°C) |
|||
Exon(s) | Forward | Reverse | Buffer 1 | Buffer 2 |
1 | tctgtccccagagactgagcacctg | gaagaggatgaaggatgagcgg | 60 | |
2–6 | ggccattctcccacatttc | ccctaggcacatctcattcc | 55 | |
4b | aagcaatggaagtccaaagg | |||
5b | cttgactccctttccggtta | |||
7 | gctgagattcttgacactgcac | ccacagacaaggggtcctc | 55 | |
8 | gaggaggaccccttgtctgt | atcgtgccactgcaaacc | 55 | |
9 | ccagccaagcatctctgtta | tcaacagggaatcagaaaggat | 55 | |
10 | ccatatgatcatgccccaat | ctgggtgaggagaagaggaa | 55 | |
11 | aagtccaccctgatgtttgg | cagaaacacagcccctcttc | 55 | |
12 | cctcccatactcccaaaagg | tccacatttcaagcataagca | 55 | |
13 | gcttcaaccgatcttcctgt | ggagtgattaatccccaagc | 55 | |
14 | aggcaatgtgcccaccta | tcacaatgcactgaacagca | 55 | |
15 | ctgcactttcccctcacagt | gcgcccaacctagaatgtat | 55 | |
16 | ggcggaggaatttaatgtga | cccagcttttctgtccttga | 55 | |
17 | aaaggaagagccccatagga | gagctacatgcaaaaccttgg | 55 | |
18 and 19 | cccttgttctctgttcctgct | gcattgttgagggaatgaca | 55 | |
20 | aatgccacaacttcgtagcc | cgtccctaccccatcatattt | 55 | |
21 | gtctgtggtcccagatgctt | gccagataccaggtctgtcc | 55 | |
22 and 23 | ttttgcagccattctgtagc | agggaaagtaaaagcgaacag | 55 | |
24 and 25 | ggccttttgaggaaatgaca | gcatgaagttgagaaagggttt | 55 | |
26 | gtggccatgtttgttttcct | ggctgagtgcagtggctatt | 55 | |
27 | taagatgggagagggtttgc | gggcacaagggaaatttaatc | 55 | |
28 | aatagtccctgccgtttgtg | ggaagcagcctgacactacc | 55 |
Buffer 1: 10× buffer (100 mM Tris, 500 mM KCl, 10 mM MgCl2, 1% Triton X-100, and 0.1% gelatin). Buffer 2: 10× buffer (100 mM Tris, 15 mM MgCl2, and 500 mM KCl).
Nested sequencing primers for exons 4 and 5.