Table 3.
Filtered experimental data from cell line RPMI-8226
| Gene Name | Gene ID | Transcript ID | RNA-Seq Transcript Expression (FPKM) | RNA-Seq Gene Expression (FPKM) | Representative Affymetrix Probe set Id | Chromosome | Affymetrix Expression |
|---|---|---|---|---|---|---|---|
| CCND3 | ENSG00000112576 | ENST00000372991 | 137.068 | 137.068 | 1562028_at | chr6p21.1 | 188.9 |
| FGFR3 | ENSG00000068078 | CUFF.23217.9 | 1.27549 | 2.96453 | 204380_s_at | chr4p16.3 | 202.9 |
| FGFR3 | ENSG00000068078 | ENST00000340107 | 1.24395 | 2.96453 | 204380_s_at | chr4p16.3 | 202.9 |
| FGFR3 | ENSG00000068078 | ENST00000260795 | 0.445095 | 2.96453 | 204380_s_at | chr4p16.3 | 202.9 |
| MAF | ENSG00000178573 | ENST00000393350 | 0.00202724 | 0.00202724 | 1566323_at | chr16q23.1 | 19.9 |
| NFKB1 | ENSG00000109320 | ENST00000505458 | 17.3606 | 29.4494 | 209239_at | chr4q24 | 1253.8 |
| NFKB1 | ENSG00000109320 | ENST00000226574 | 12.0888 | 29.4494 | 209239_at | chr4q24 | 1253.8 |
| WHSC1 | ENSG00000109685 | ENST00000382891 | 38.771 | 55.1773 | 1557780_at | chr4p16.3 | 32.2 |