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. 2013 Dec 4;8(12):e80822. doi: 10.1371/journal.pone.0080822

Table 2. Pseudogenes in Ca. E. faulkneri L2 and L5.

L2 Coordinates L5 Coordinates Strand Nearest homolog Function
52194–53458 + A1OE_48 ftsK/SpoIIIE family protein Replication
153326–154049 155506–156085 + UTP-glucose-1-phosphate uridylyltransferase Glucose
[alphaproteobacterium BAL199] (WP_007680598) metabolism
431976–432886 A1OE_465 N-acetylmuramoyl- L-alanine amidase Peptidoglycan
family protein degradation
439025–440102 + A1OE_470 peptidase M48 family protein Heat shock
protein
722626–724001 + P856_442 chromosomal replication initiator Replication
protein DnaA
903089–903300 + 23S rRNA (uracil-5-)-methyltransferase, partial Ribosomal
[Methylobacterium extorquens] (WP_003607533) structure
1019673–1020560 + P856_614 hydroxyacylglutathione hydrolase GloB β-lactamase
1237554–1237896 A1OE_1333 helix-turn-helix family protein Regulation
1317241–1318045 1349258–1350574 + Guanosine polyphosphate pyrophosphohydrolase Stringent
/sythetase alpha proteobacterium BAL199 response
(WP_007669831)