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. 2013 Dec 4;8(12):e80822. doi: 10.1371/journal.pone.0080822

Table 7. Primers used in this study.

Name Sequence Reference Notes 5′ coordinatea
ef33_734_Rout_2 CGTAGACCATAACGCAGTATGG This study Contig joining 702,249
ef33_738_Lout_2 CGCAAGCACTAAACGGCAC This study Contig joining 705,184
ef33_1327_Rout CGTCTATTAAAGGCTGCATCGG This study Contig joining 1,262,269
ef33_1329_Lout GGTTCGCATGAGCTTGTATCG This study Contig joining 1,265,356
ef33_829_Rout TCCACCACTGACATTAGTAGATAC This study Contig joining 798,954
ef33_832_Lout CAGTACAGCGCGAGATACAATG This study Contig joining 802,162
ef33_124_Lout ACACCTTCAGAACTTACAGCAATG This study Contig joining 123,860
Thal16SFrev AGGGTGTGGTTATTGGAGAC This study Contig joining 117,880
Thal_16S-F GTCTCCAATAACCACACCCT Kwan et al. Contig joining 117,899
2012 [13]
Thal_16S-R GCTTTCGATACTGCATAGCTC Kwan et al. Contig joining 117,512
2012 [13]
Thal_23S_R CCTCACGGTACTAGTTCAC Kwan et al. Contig joining 119,618
2012 [13]
Supercontig_9- GAATAATTGATACTCCAGCTAGC Kwan et al. Contig joinint 114,009
R-out 2012 [13]
27F AGAGTTTGATCCTGGCTCAG Weisburg et al. 16S 116,943
1991 [80] amplification
1492R GGTTACCTTGTTACGACTT Reysenbach et al. 16S 118,390
1992 [81] amplification
M13_4_TOPO-F GTAAAACGACGGCCAG Supplied with TOPO clone
TOPO-TA kit sequencing
M13_4_TOPO-R CAGGAAACAGCTATGAC Supplied with TOPO clone
TOPO-TA kit sequencing
ef33_829_insert_F TTGTTAAGTGCATCATGCACCG This study Sequencing 800,604
ef33_832_insert_R AACAGCAAAACTCAGATAATG This study Sequencing 801,342
ef33_1327_insert_F ATGAGATAACTGGATACACGC This study Sequencing 1,263,989
ef33_1329_insert_R TTAGTGTAGGAGTAGTATTGTTC This study Sequencing 1,264,424
ef33_734_insert_F TCAATCAACAAGAGAGGAGTAC This study Sequencing 703,427
ef33_738_insert_R AAGACGTCATTTGGCATAGTTAGG This study Sequencing 704,265
ef33_23Sreg_124F2 ATTCAAATAGCAACCGGGATAAC This study Sequencing 123,190
ef33_23Sreg_124F3 TAAGGATAATCTGCCATACATAAC This study Sequencing 122,527
ef33_23Sreg_124R1 CCTGACTGCGAGGCTGAC This study Sequencing 121,371
ef33_23Sreg_C2F2 CTACCCCCTACTCTGTGCC This study Sequencing 120,807
ef33_23Sreg_R1 GAGGTCAGCTTACAAGAAAACCG This study Sequencing 118,477
a

The coordinates shown refer to the chromosome of Ca. E. faulkneri L5.