Table 3.
List of genomes for phylogenomic analysis
| Species Name | Kingdom | Phylum | Subphylum | Life Style* |
|---|---|---|---|---|
| Aspergillus fumigatus Af293 | Fungi | Ascomycota | Pezizomycotina | Animal pathogen |
| Aspergillus nidulans | Fungi | Ascomycota | Pezizomycotina | Saprotroph |
| Blumeria graminis | Fungi | Ascomycota | Pezizomycotina | Plant pathogen (Biotroph) |
| Botrytis cinerea | Fungi | Ascomycota | Pezizomycotina | Plant pathogen (Necrotroph) |
| Coccidioides immitis RS | Fungi | Ascomycota | Pezizomycotina | Animal pathogen |
| Colletotrichum graminicola M1.001 | Fungi | Ascomycota | Pezizomycotina | Plant pathogen (Hemibiotroph) |
| Fusarium graminearum | Fungi | Ascomycota | Pezizomycotina | Plant pathogen (Necrotroph) |
| Fusarium oxysporum | Fungi | Ascomycota | Pezizomycotina | Plant pathogen (Necrotroph) |
| Histoplasma capsulatum H88 | Fungi | Ascomycota | Pezizomycotina | Animal pathogen |
| Magnaporthe oryzae 70-15 | Fungi | Ascomycota | Pezizomycotina | Plant pathogen (Hemibiotroph) |
| Mycosphaerella graminicola | Fungi | Ascomycota | Pezizomycotina | Plant pathogen (Hemibiotroph) |
| Neurospora crassa | Fungi | Ascomycota | Pezizomycotina | Saprotroph |
| Podospora anserine | Fungi | Ascomycota | Pezizomycotina | Saprotroph |
| Candida albicans | Fungi | Ascomycota | Saccharomycotina | Animal pathogen |
| Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Saccharomycotina | Saprotroph |
| Schizosaccharomyces pombe | Fungi | Ascomycota | Taphrinomycotina | Saprotroph |
| Heterobasidion irregular TC 32-1 | Fungi | Basidiomycota | Agaricomycotina | Plant pathogen (Necrotroph) |
| Laccaria bicolor | Fungi | Basidiomycota | Agaricomycotina | Saprotroph |
| Phanerochaete chrysosporium | Fungi | Basidiomycota | Agaricomycotina | Saprotroph |
| Serpula lacrymans | Fungi | Basidiomycota | Agaricomycotina | Saprotroph |
| Cryptococcus neoformans var. grubii H99 | Fungi | Basidiomycota | Agricomycotina | Animal pathogen |
| Melampsora laricis-populina | Fungi | Basidiomycota | Pucciniomycotina | Plant pathogen (Biotroph) |
| Puccinia graminis | Fungi | Basidiomycota | Pucciniomycotina | Plant pathogen (Biotroph) |
| Ustilago maydis 521 | Fungi | Basidiomycota | Ustilaginomycotina | Plant pathogen (Hemibiotroph) |
| Allomyces macrogynus | Fungi | Blastocladiomycota | N/D | Saprotroph |
| Batrachochytrium dendrobatidis JAM81 | Fungi | Chytridiomycota | N/D | Animal pathogen |
| Phycomyces blakesleeanus | Fungi | Zygomycota | Mucoromycotina | Saprotroph |
| Rhizopus oryzae | Fungi | Zygomycota | Mucoromycotina | Saprotroph |
| Phytophthora infestans | Chromista | Oomycota | Oomycotina | Plant pathogen |
| Arabidopsis thaliana | Viridiplantae | Streptophyta | N/D | |
| Oryza sativa | Viridiplantae | Streptophyta | N/D | |
| Dorosophila melanogaster | Metazoa | Arthropoda | N/D | |
| Caenorhabditis elegans | Metazoa | Nematoda | N/D | |
| Homo sapiens | Metazoa | Chordata | Craniata |
* Information about life style and host ranges are shown only for 29 fungal and Oomycete species.