Table 1.
Differential gene expression counts for data mining analyses of the Verticillium dahliae genome
| Gene category | Total number in V. dahliae genome |
Differentially expressed* |
||
|---|---|---|---|---|
| Upregulated | Downregulated | Total | ||
| Hydrophobins |
5 |
0 |
3 |
3 |
| Tetrahydroxynapthalene reductase |
3 |
3 |
0 |
3 |
| Vascular wilt specific genes |
14 |
4 |
0 |
4 |
| Cytochrome P450s |
69 |
3 |
0 |
3 |
| LS region genes |
354 |
41 |
6 |
47 |
| ABC type transporters |
35 |
4 |
1 |
5 |
| MFS type transporters |
272 |
13 |
2 |
15 |
| Predicted secretome |
780 |
40 |
33 |
73 |
| Polyketide synthases |
11 |
2 |
0 |
2 |
| Small cysteine rich proteins |
258 |
14 |
11 |
25 |
| NRPSs | 8 | 0 | 0 | 0 |
*Differential expression between MS + and NoMS libraries.