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Respective performance of the different methods against reference dataset of 30 Archaeal genomes
| BLAST search (E < 10e-5) | HMM search (p < 10e-5) | Repeats search | IRs search | |
|---|---|---|---|---|
| Number of different ISs |
190 |
187 |
125 |
67 |
| Number of different ISs > 2 copies |
115 |
120 (+4,3%) |
125 (+8.7%) |
67 (-47,8%) |
| Number of different MITEs |
26 |
26 (+0%) |
39 (+50%) |
39(+50%) |
| False positives | 0 | 11 | 99 | 0 |
