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. 2013 Oct 18;3(12):2173–2185. doi: 10.1534/g3.113.007674

Table 3. Selected differentially expressed genes.

Gene Name Gene Description GCB Read Counts ABC Read Counts Fold Change FDR
ABC up
 ARNT2 Aryl-hydrocarbon receptor nuclear translocator 2 0.00 386.14 N/A 2.25E-08
 CCR7 Chemokine (C-C motif) receptor 7 46.30 8,252.02 178.25 4.72E-23
 CXCR5 Chemokine (C-X-C motif) receptor 5 1,845.20 12,595.47 6.83 8.83E-07
 FGF2 Fibroblast growth factor 2 (basic) 5.23 149.82 28.63 1.34E-02
 PDGFA Platelet-derived growth factor alpha polypeptide 3.25 106.66 32.83 1.59E-02
 PDGFRB Platelet-derived growth factor receptor, beta polypeptide 0.43 26.39 60.79 1.62E-02
 TGFA Transforming growth factor, alpha 4.50 132.35 29.42 2.46E-02
GCB up
 BCL6 B-cell CLL/lymphoma 6 15,105.68 5,124.25 0.34 1.94E-02
 PRKCA Protein kinase C, alpha 5,600.83 1,531.13 0.27 5.00E-04

GCB, germinal center B-cell-like; ABC, activated B-cell-like; FDR, false-discovery rate; N/A, not available; CLL, chronic lymphocytic leukemia.