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. 2013 Sep 25;6:279. doi: 10.1186/1756-3305-6-279

Table 3.

Pairwise identities (%) among the 18 ITS-2 sequences of Haemonchus contorts representing 152 adults of H. contortus from China using selected sequences for H. contortus and H. placei from the GenBank database

Sample code 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
1-Hlj10 (KC415117)
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
2-Ln9 (KC415118)
99.5
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
3-SZ9 (KC415119)
99.5
99.1
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
4-Sz13 (KC415120)
98.7
98.2
99.1
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
5-Yd2 (KC415121)
99.1
98.7
99.5
99.5
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
6-Yn16 (KC415122)
99.1
98.7
98.7
99.5
99.1
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
7-Yd14 (KC415123)
99.5
99.1
99.1
99.1
99.5
99.5
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
8-SZ18 (KC415124)
99.5
99.1
99.1
99.1
98.7
99.5
99.1
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
9-Sz22 (KC415125)
98.7
99.1
99.1
99.1
98.7
98.7
98.2
99.1
-
 
 
 
 
 
 
 
 
 
 
 
 
 
10-Sz21 (KC415126)
99.1
99.5
99.5
98.7
99.1
98.2
98.7
98.7
99.5
-
 
 
 
 
 
 
 
 
 
 
 
 
11-Sx7 (KC415127)
99.1
99.5
98.7
98.7
98.2
99.1
98.7
99.5
99.5
99.1
-
 
 
 
 
 
 
 
 
 
 
 
12-YD7 (KC415128)
99.1
98.7
99.5
99.5
99.1
99.1
98.7
99.5
99.5
99.1
99.1
-
 
 
 
 
 
 
 
 
 
 
13-Sz1 (KC415129)
98.2
98.7
98.7
98.7
98.2
98.2
97.8
98.7
99.5
99.1
99.1
99.1
-
 
 
 
 
 
 
 
 
 
14-Sz12 (KC415130)
98.2
98.7
97.8
97.8
97.4
98.2
97.8
98.7
98.7
98.2
99.1
98.2
99.1
-
 
 
 
 
 
 
 
 
15-Ln1 (KC415131)
97.8
98.2
98.2
98.2
97.8
97.8
97.4
98.2
99.1
98.7
98.7
98.7
99.5
99.5
-
 
 
 
 
 
 
 
16-Gx3 (KC415132)
98.7
99.1
98.2
98.2
97.8
98.7
98.2
99.1
99.1
98.7
99.5
98.7
99.5
99.5
99.1
-
 
 
 
 
 
 
17-Yn20 (KC415133)
98.7
98.2
99.1
99.1
98.7
98.7
98.2
99.1
99.1
98.7
98.7
99.5
99.5
98.7
99.1
99.1
-
 
 
 
 
 
18-Gx7 (KC415134)
99.1
98.7
98.7
98.7
98.2
99.1
98.7
99.5
98.7
98.2
99.1
99.1
99.1
99.1
98.7
99.5
99.5
-
 
 
 
 
19-H.contortus (X78803.1)
99.1
98.7
99.5
98.7
99.1
98.2
98.7
98.7
98.7
99.1
98.2
99.1
98.2
98.2
98.7
97.8
98.7
98.2
-
 
 
 
20-H.contortus (EU084691.1)
100
99.5
99.5
98.7
99.1
99.1
99.5
99.5
98.7
99.1
99.1
99.1
98.2
98.2
97.8
98.7
98.7
99.1
99.1
-
 
 
21-H.placei (X78812.1)
97.8
97.4
98.2
97.4
97.8
96.9
97.4
97.4
97.4
97.8
96.9
97.8
96.9
96.9
97.4
96.5
97.4
96.9
98.7
97.8
-
 
22-H.placei (AJ577466.1) 97.4 96.9 97.8 96.9 97.4 96.5 96.9 96.9 96.9 97.4 96.5 97.4 96.5 96.5 96.9 96.1 96.9 96.5 98.2 97.4 99.5 -