Table 5.
Predicted novel miRNA in Musa A- and Musa B-genomes
| miRNA family | Locus A-genome | Locus B = genome | Mature_miRNA sequence 5′ – 3′ |
|---|---|---|---|
| mba-miR1 |
|
chr11: 8494985..8495047 |
AGAAACUUUUGUUGGAGAGGAAC |
| mac-miR2 mba-miR2 |
chr5:6134793..6134884 |
chr5: 5463327..5463417 |
CCGCAGGAGAGAUGAUGCCGCU |
| mba-miR3 |
|
chrUn_random:810706..810748 |
UACCGUACUGUACCGGCGUUU |
| mba-miR4 |
|
chr10: 20915746..20915798 |
CCUGAUUUGCUAAGUAGAUUU |
| mba-miR5 |
|
chr7: 16539311..16539413 |
UGGUUGAUGACGAUGUCGGCC |
| mac-miR6 mba-miR6 |
chr7:1377251..1377323 |
chr7: 1254647..1254718 |
UAGGAGAGAUGACACCGGCU |
| mac-miR7 mba-miR7 |
chr1:10560884..10561005 |
chr1: 9229340..9229458 |
AAACUAGUGCUAAGACCCAAUCUC |
| mba-miR8 |
|
chr1: 10667301..10667378 |
GGUGGUCUGGAUGAGGAUGCC |
| mac-miR9 mba-miR9 |
chr7:4569849..4569909 |
chr7: 4219274..4219333 |
UGGCUGAUGAUGAGUGAUCUU |
| mba-miR10 |
|
chr8: 20785187..20785267 |
CUUUGGCUUCUGGGUAGACGUA |
| mba-miR11 |
|
chr9: 8635028..8635089 |
UGUACGGAUAUGGUAGAGGGGCGU |
| mba-miR12 |
|
chr4: 17987962..17988016 |
AUCCCCGAGUGGGGUCGGUCGGAC |
| mba-miR13 |
|
chr8: 23338135..23338275 |
CUCGAGAUAUAUGAGUGUGGACA |
| mba-miR14 |
|
chrUn_random: 21488242..21488315 |
GGCACCUCGAUGUCGGCUC |
| mba-miR15 |
|
chr9: 25179371…25179434 |
GAGGAGGAGAAGAAAUGGAUCUG |
| mba-miR16 |
|
chr6: 3503608..3503675 |
GAAGAGGAAGGAGAAGUCG |
| mba-miR17 |
|
chr1: 17563902..17563986 |
CAGAAGUAGAAUACAUAAC |
| mba-miR18 |
|
chrUn_random: 135937842..135937988 |
UCCUUUUAGACCGUUGACGA |
| mac-miR19 |
chr4:22573796..22573893 |
|
UCCAGGAGAGAUGACACCAAC |
| mac-miR20 |
chr1:4998969..4999025 |
|
GGCGAUGAUGAUUGGUGAAUGU |
| mac-miR21 |
chrUn_random:15968301..15968390 |
|
GGAGAGAUGGCUGAGUGGACUAAA |
| mac-miR22 |
chrUn_random:23270434..23270480 |
|
CGAGGUGUAGCGCAGUCUGG |
| mac-miR23 |
chr8:31825102..31825180 |
|
UGGGAAGAAGACAAGGACAACAUG |
| mac-miR24 |
chr6:8249043..8249103 |
|
GAUCUCUGACCGAGCGGACUCC |
| mac-miR25 |
chr4:345377..345475 |
|
CAACGAUGAUGAGCCUACUAGACC |
| mac-miR26 |
chr11:15733314..15733359 |
|
AGAUGAGGUAAAGUAGUGCGA |
| mac-miR27 |
chr6:9168756..9168839 |
|
CAGCGACCUAAGGAUAACU |
| mac-miR28 | chr7:28606179..28606234 | GCGGAUGUGGCCAAGUGGU |