Table 1. List of proteins/peptides used, their amino acid sequences, net charge and growth inhibitory concentrations against F. graminearum.
Name | Amino acid sequence | #Charge | &IC100 |
---|---|---|---|
MtDef4 | RTCESQSHKFKGPCASDHNCASVCQTERFSGGRCRGFRRRCFCTTHC | + 6.1 | 3 |
MtDef4RGFRRR/RGAARR* | RTCESQSHKFKGPCASDHNCASVCQTERFSGGRCRGAARRCFCTTHC | + 5.1 | >6 |
MtDef4RGFRRR/AAAARR* | RTCESQSHKFKGPCASDHNCASVCQTERFSGGRC AAAARRCFCTTHC | + 4.1 | >6 |
MtDef4RGFRRR/RGFRAA* | RTCESQSHKFKGPCASDHNCASVCQTERFSGGRCRGFRAA CFCTTHC | + 4.1 | >6 |
MsDef1 | RTCENLADKYRGPCFSGCDTHCTTKENAVSGRCRDDFRCWCTKRC | + 3.1 | >6 |
MsDef4-γ4 | RTCENLADKYRGPCFSGCDTHCTTKENAVSGRC RGFRRR CWCTKRC | + 7.1 | 3-4 |
GMA4-C | GRCRGFRRRCFCTTHC | + 5.1 | < 6 |
TMR-GMA4-C | TAM-GRCRGFRRRCFCTTHC | NA | 48 |
TMR-GMA4-CM | TAM-GRCAAAARRCFCTTHC | NA | >96 |
# Net charge of the peptide was estimated (at pH < 7.4; 7.4 = pH of SFM used to conduct assays) using Biochemistry Online- http://vitalonic.narod.ru/biochem/index_en.html
& Amount of protein (µM) required to inhibit F. graminearum conidial germination completely in SFM.
* Replaced amino acid(s) arein italics.
Cysteines are inbold.