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Viral escape in plasma and tissues. A. Escape in plasma, lymph nodes, PBMC and rectal biopsy of one animal (error bars represent confidence intervals of a proportion); B. Viral escape in the gut and blood lags behind escape in plasma (ie: retaining a higher proportion of WT virus), but not in lymph nodes (Friedman test with Dunn’s multiple comparison post-test). Fractions WT belonging to the same animal in different compartments in B are represented by the same symbol.
