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. 2013 Oct 23;7(Suppl 4):S11. doi: 10.1186/1752-0509-7-S4-S11

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Copyright © 2013 Rasheed et al.; licensee BioMed Central Ltd.

This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Runtime comparison. Computational time taken by LSH-Div, ESPRIT, Mothur and DOTUR to process eight environmental samples in log₁₀scale. FS312(t) sample is reduced to 4002 sequences and FS396(t) sample is reduced to 3467 sequences. Avg. Time is reported as average computational time taken by each method across eight environmental samples. Mothur and DOTUR are not able to process FS312 and FS319 samples (runtime is shown as 0) due to large number of sequences and memory limitations. The parameter setting used by LSH-Div algorithm to obtain these results is k = 30, w-mer = 3.