Table 1.
Serotype-specific DENV and JEV oligonucleotide primer and probe sequences*
Virus | Forward primer, 5′→3′ | Reverse primer, 5′→3′ | Probe, 5′→3′ |
---|---|---|---|
DENV-1 | TCAAAGGAGAAGACGGGTGTTGGT | TGACCCTGCAGAGACCAATGACTT | FAM-ACGGCATGGAAATCAGACCAGTCAAGGA-TAM |
DENV-2 | GAAATGGGTGCCAACTTCAAGGCT | TCTTTGTGCTGCACTAGAGTGGGT | FAM-ACTAACAGATGGTGAAGAGCGGGTGA-TAM |
DENV-3 | AGAAGGTCAGAACCAACGCAGCTA | TGTAAACGCAGCTTCCACACTTGC | FAM-AAGAGAACCAATGGGACAGTGCGAGA-TAM |
DENV-4 | ATCTCTAGCGGCCATTGCTAACCA | AATAGCATCCCATTGCCAACAGCG | FAM-AAAGGATGGCCGCTCCACAGAATGGA-TAM |
JEV | ACCTGAGACAAAGGAATGCCCTGA | CACACGGGTTGATGTGATGCCAAA | FAM-AGCACAGAGCTTGGAACAGCATGCAA-TAM |
DENV = dengue virus; JEV = Japanese encephalitis virus.