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. 2013 Dec 5;8(12):e81596. doi: 10.1371/journal.pone.0081596

Table 2. Primers and probe sequences used in qPCR screen of canine stool samples for enteric viruses.

Virus Primer/Probe Ref
Canine norovirus F: GCTGGATGCGGTTCTCTGACR: TCATTAGACGCCATCTTCATTCACProbe: FAM-AGCGAGATTGCGATCTCCCTCCCACAT-BHQ This report
Canine parvovirus F: AAACAGGAATTAACTATACTAATATATTTAR: AAATTTGACCATTTGGATAAACTProbe: VIC-TGGTCCTTTAACTGCATTAAATAATGTACC-BHQ [32]
Canine entericcoronavirus F: TTGATCGTTTTTATAACGGTTCTACAAR: AATGGGCCATAATAGCCACATAATProbe: Cy5-ACCTCAATTTAGCTGGTTCGTGTATGGCATT -BHQ [32]
Equine arteritis virus(internal control) F: CATCTCTTGCTTTGCTCCTTAGR: AGCCGCACCTTCACATTGProbe: Cy5.5-CGCTGTCAGAACAACATTATTGCCCAC-BHQ2 [33]

Four primer-probe sets were used in the viral nucleic acid survey. CPV, CECoV and EAV primer-probe sets have previously been published whereas the CNV primer-probe set was designed for this study.