Table 1.
ADAR2 sites in S. cerevisiae strain INVSc1 from RNA-seq analysis
| Position | Edited Region | G/G+A | Transcript |
|---|---|---|---|
| ChrII: 278,998 | 5′-TCTATACTTTAACGTCAAGGA-3′ | 15% | GAL1 (5′-UTR) |
| ChrII: 278,999 | 5′-CTATACTTTAACGTCAAGGAG-3′ | 11% | GAL1 (5′-UTR) |
| ChrII: 680,804 | 5′-GCATCAAGAAACGGACTTGAT-3′ | 49% | U2 snRNA (A1054) |
| ChrII: 680,826 | 5′-AGGGATTTGAAGAATGCCGGC-3′ | 78% | U2 snRNA (A1032) |
| ChrII: 680,853 | 5′-CCTATGTCATAGAGGCGTTTT-3′ | 83% | U2 snRNA (A1004) |
| ChrII: 681,346 | 5′-GGGCGCTCTTATTGTTGATTT-3′ | 89% | U2 snRNA (A512) |
| ChrIV: 331,829 | 5′-ACTTGTCATTAGACGTTCAGT-3′ | 63% | BDF2 (coding R269G) |
| ChrVI: 75,228 | 5′-GAACTTGGCTATCCCTACCAA-3′ | 16% | HAC1 (coding I18V) |
| ChrVI: 75,995 | 5′-GGTTATTGGAAGCTTTCTTTT-3′ | 19% | HAC1 (intron) |
| ChrVI: 76,061 | 5′-CTTATTACTAAGAAATGGACG-3′ | 13% | HAC1 (intron) |
| ChrVI: 76,276 | 5′-GTGCTTACTCAACCGAAGAAG-3′ | 14% | HAC1 (3′UTR) |
| ChrVI: 76,404 | 5′-GGCTGCAAGGAGCAAGACTGG-3′ | 23% | HAC1 (3′UTR) |
| ChrVII: 311,091 | 5′-TGTGCAACCAATATGTCGTGT-3′ | 45% | RL28 (intron) |
| ChrXII: 453,079 | 5′-CGATCAACTTAGAACTGGTAC-3′ | 15% | 25 S rRNA (A2104) |
| ChrXIII: 634,284 | 5′-TTATTATTCGAGACCGCTTTG-3′ | 10% | HSC82 (coding E644G) |
| ChrXIV: 230,439 | 5′-TTTTTGGGTTAAACTGATTTT-3′ | 59% | U1 snRNA (A235) |
| ChrXIV:230,607 | 5′-TTCCAATAGTAGAAGGACGTT-3′ | 35% | U1 snRNA (A67) |
| ChrXIV: 230,471* | 5′-ATCATTGGTTAATCCCTTGAT-3′ | 59% | U1 snRNA (A203) |
| ChrXIV:230,470* | 5′-TCATTGGTTAATCCCTTGATT-3′ | 20% | U1 snRNA (A204) |
*
Site was not predicted in the whole transcriptome sequencing screen; it was observed while confirming candidate sites. G/G+A for these sites are observed values.