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. Author manuscript; available in PMC: 2014 Dec 31.
Published in final edited form as: J Immunol Methods. 2013 Aug 31;0:10.1016/j.jim.2013.08.014. doi: 10.1016/j.jim.2013.08.014

Table 1.

HLA binding predictions of each peptide present in the block of 10-mer peptides starting at position 232 in an MSA of influenza HA proteins. Prediction were performed for HLA A*02:01 allele, but can be done for a number of alleles (see materials and methods). The table is also included in the BlockLogo web server output if HLA binding predictions are selected upon submission.

# Peptide Frequency (%) Accumulated
frequency (%)
Predicted binding
affinity (nM)
1 SLYQNADAYV 64.65 64.65 11.45
2 FLYAQASGRI 14.14 78.79 24.37
3 ALYHTENAYV 7.07 85.86 9.74
4 TLYRTENAYV 6.06 91.92 20.51
5 FLYAQAAGRI 6.06 97.98 22.23
6 FLHAQASGRI 1.01 98.99 130.48
7 SLYQNADSYV 1.01 100.00 19.39