Table 4.

Confirmation of SNP linkage to upregulation in gene expression

Strain	Gene	Fold change*
M. smegmatis mc2155 (pPG101)	Mb1750c	16.1 ± 3.2
M. smegmatis mc2155 (pPG101)	Mb1749c	12.5 ± 1.2
M. smegmatis mc2155 (pPG102)	Mb1750c	1.9 ± 0.8
M. smegmatis mc2155 (pPG102)	Mb1749c	1.4 ± 0.4
Mb 2122/97 (pPG108)	nirB	2.0 ± 1.0
Mb 2122/97 (pPG108)	nirD	1.3 ± 0.5
Mb 2122/97 (pPG109)	nirB	52.9 ± 15.9
Mb 2122/97 (pPG109)	nirD	3.1 ± 0.8

*Fold changes are the mean ratios ± standard deviation.