Table 2. Diversity and neutrality indices of Echinococcus granulosus sensu stricto population calculated from nucleotide sequence of mitochondrial cox1 gene.
Geographical origin | n | S | K | H | Hd ± S.D | π ± S.D | D | Fu’s Fs |
---|---|---|---|---|---|---|---|---|
SA | 103 | 22 | 1.334 | 20 | 0.664±0.050 | 0.0039 ±0.0005 | -2.100* | -15.396** |
EA | 46 | 13 | 1.373 | 14 | 0.716±0.070 | 0.0040±0.0006 | -1.629* | -9.286** |
EU | 51 | 20 | 1.739 | 17 | 0.690±0.071 | 0.0051±0.0007 | -1.935* | -11.269** |
ME | 94 | 23 | 1.748 | 25 | 0.761±0.040 | 0.0051±0.0004 | -1.816* | -20.684** |
AF | 19 | 8 | 2.22 | 10 | 0.918±0.036 | 0.0065±0.0007 | -0.099 | -4.311** |
SAM | 51 | 17 | 1.27 | 13 | 0.685±0.069 | 0.0037±0.0006 | -2.060* | -7.917** |
AUS | 5 | 7 | 3.20 | 5 | 1.000±0.126 | 0.0093±0.0021 | -0.331 | -2.116 |
TOTAL | 369 | 67 | 1.82 | 73 | 0.799±0.017 | 0.0053±0.0002 | -2.462* | -111.06* |
Statistical significance: * P < 0.05; ** P < 0.01
SA: South Asia; EA: East America; EU: Europe; ME: Middle East; AF: Africa; SAM: South America; AUS: Australia.
n: number of sequences examined; S: Number of segregating (polymorphic/variable) sites; K: Average number of pairwise nucleotide differences; H: Number of haplotypes; Hd: Haplotype diversity; π: nucleotide diversity; D: Tajima's D test statistics