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. Author manuscript; available in PMC: 2015 Jan 5.
Published in final edited form as: Virology. 2013 Oct 24;0:10.1016/j.virol.2013.10.011. doi: 10.1016/j.virol.2013.10.011

Table 1.

Oligonucleotides used for the construction of plasmids, recombinant BACs, and PCR.

Name Sequence Purpose
KanR For CAACCCTCAGCAGTTTCTTAAGACCCATCAGATGTTTCCAGGCT
CCCCCAAGGACCTGAAATGACCTAGAGAACCCACTGCTTACTGG
KanR
KanR Rev AACTGCTGAGGGCCAGTGTTACAACCAATTAACC
BAD-SF For GAGAGCGTTAAAAAACACAAACGGCTGGATGTGTGCCGCGCTA
AAATGGGCTATATGCTGGTAACGCCATTTTGCAAGGCATGGA
BAD-SF
BAD-SF Rev CGGTCCCGGTGTCTTCTATGGAGGTCAAAACAGCGTGGATGG
CGTCTCCAGGCGATCTGACGACTCAGTCTGTCGGAGGACTGG
BAD-P For GAGAGCGTTAAAAAACACAAACGGCTGGATGTGTGCCGCGC
TATCTCCAGGCGATCTGACGACTCAGTCTGTCGGAGGACTGG
BAD-P
BAD-P Rev ACAGCGTGGATGGCGTCTCCAGGCGATCTGACGGTTCACTAA
ACGAGCTCTGCTTATATA GAGCTCGGGAAGCAGAAGCG
MIEP For GGATCAACCTGGAATACGACAAG MIEP
MIEP Rev CTCTATAGGCGGTACTTACGTC
MIEP-K For CAACTGTACATTTATATTGGCTCATGTCCAACATTACCGCCATG
TTGACATTGATTATTGACTAGTTAGAGAACCCACTGCTTACTGG
KanR
MIEP-K Rev AACTTGTACAGCCAGTGTTACAACCAATTAACC
BAD-Rev For GAGAGCGTTAAAAAACACAAACGGCTGGATGTGTGCCGCGCTA
AAATGGGCTATATGCTGCAGTGAATAATAAAATGTGTGTTTGT
BAD-Rev
BAD-Rev Rev CGGTCCCGGTGTCTTCTATGGAGGTCAAAACAGCGTGGATGGC
GTCTCCAGGCGATCTGACGGTTCACTAAACGAGCTCTGCTT
BAD-554 For GAGAGCGTTAAAAAACACAAACGGCTGGATGTGTGCCGCGCTA
AAATGGGCTATATGCTGCAGTGAATAATAAAATGTGTGTTTGT
BAD-554
BAD-554 Rev GATCTGAACTTCTCTATTCTTGGTTTGGTATTTTTCCATGCCTTG
CAAAATGGCGTTACCCCCGTAATTGATTACTATTAATA
BAD-662 For TTTGAATTAACCAATCAGCCTGCTTCTCGCTTCTGTTCGCGCG
CTTCTGCTTCCCGAGCTCACGTTGTATCCATATCATAATATG
BAD-662
BAD-662 Rev CGGTCCCGGTGTCTTCTATGGAGGTCAAAACAGCGTGGATGG
CGTCTCCAGGCGATCTGACGGTTCACTAAACGAGCTCTGCTT
IE1 For CGTCCTTGACACGATGGA IE1
IE1 Rev TCTCCTCGAAAGGCTCATGA
GAPDH For GAGCCAAAAGGGTCATC GAPDH
GAPDH Rev GTGGTCATGAGTCCTTC