Table 3.
5′-XX-3′ | Hairpin DNA | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | Occurrences | Cleavages | Percent cleaved | |
AA | 2 | 2 | 3 | 2 | 4 | 5 | 3 | 2 | 3 | 2 | 28 | 11 | 39% |
AC | 1 | 1 | 1 | 1 | 1 | 5 | 3 | 60% | |||||
AG | 1 | 1 | 2 | 1 | 5 | 0 | 0% | ||||||
AT | 4 | 2 | 2 | 3 | 3 | 2 | 2 | 2 | 2 | 3 | 25 | 16 | 64% |
CA | 1 | 1 | 1 | 1 | 1 | 5 | 1 | 20% | |||||
CC | 1 | 1 | 2 | 1 | 50% | ||||||||
CG | 2 | 2 | 1 | 1 | 6 | 0 | 0% | ||||||
CT | 2 | 1 | 3 | 1 | 33% | ||||||||
GA | 2 | 1 | 1 | 3 | 1 | 1 | 9 | 9 | 100% | ||||
GC | 1 | 2 | 1 | 4 | 4 | 100% | |||||||
GG | 2 | 1 | 2 | 5 | 1 | 20% | |||||||
GT | 1 | 1 | 1 | 2 | 5 | 5 | 100% | ||||||
TA | 2 | 1 | 2 | 2 | 3 | 3 | 2 | 3 | 2 | 1 | 21 | 6 | 29% |
TC | 1 | 1 | 1 | 1 | 1 | 5 | 0 | 0% | |||||
TG | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 7 | 0 | 0% | |||
TT | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 3 | 2 | 15 | 3 | 20% |