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. Author manuscript; available in PMC: 2014 Oct 29.
Published in final edited form as: Biochemistry. 2013 Oct 16;52(43):10.1021/bi401218r. doi: 10.1021/bi401218r

Table 3.

Dependence on 5′ Mismatches: Strand Incision Rates of APE1 Acting on AP, AP-Red, or THF DNAa,b

kchemistry (s−1)a,b

Substrate MM-1 MM-2 MM-3 MM-4
AP 156 ± 29 312 ± 29 ≥700 ≥700
AP-Red 163 ± 21 307 ± 24 ≥700 ≥700
THF 116 ± 29c 194 ± 32d 575 ± 65 ≥700
a

Measured at 37 °C under transient-state conditions using RQF instrumentation.

b

Error represents the standard deviation from at least four experiments.

c

p=0.04 when compared to AP DNA using student’s T test.

d

p=0.008 when compared to AP DNA using student’s T test.