Table 2. Repeat Composition of the Studied Genomes of Species of Orobanche, Phelipanche, Schwalbea, and Lindenbergia Deduced from the Individual Genome Screenings.
| GP (%) |
|||||||||
|---|---|---|---|---|---|---|---|---|---|
| L. philippensis | S. americana | O. cumana | O. gracilis | O. crenata | O. pancicii | P. purpurea | P. lavandulacea | P. ramosa | |
| Retrotransposon | |||||||||
| Ty1/Copia | 17.21 | 8.09 | 16.01 | 18.41 | 21.42 | 18.82 | 10.67 | 20.53 | 22.83 |
| Ty3/Gypsy | 1.93 | 2.67 | 17.02 | 28.34 | 21.44 | 24.16 | 20.59 | 15.16 | 15.92 |
| Unclassified LTR | 0.02 | 1.88 | — | 1.71 | 0.13 | 0.69 | 0.04 | — | 0.25 |
| LINE/SINE | 0.67 | 0.37 | 0.41 | 0.47 | 0.56 | 1.04 | 0.21 | 0.13 | 0.17 |
| Transposon | |||||||||
| hAT | — | 0.29 | 0.06 | 0.11 | 0.12 | 0.24 | — | 0.04 | 0.07 |
| Mutator | 0.16 | 0.87 | 0.11 | 0.23 | 0.11 | 0.28 | 0.17 | 0.42 | 0.53 |
| RC/Helitron | — | 0.18 | 0.06 | — | 0.22 | 0.12 | 0.02 | 0.07 | 0.35 |
| En-Spm | 0.17 | 1.25 | 0.55 | 0.65 | 0.74 | 1.04 | 0.62 | 1.27 | 1.37 |
| PIF-Harbinger | — | — | — | 0.04 | — | 0.01 | — | — | — |
| Tc1-Mariner | — | 0.02 | — | 0.03 | — | — | — | 0.01 | 0.04 |
| rDNA | 1.81 | 1.56 | 0.67 | 1.36 | 1.74 | 1.34 | 0.06 | 0.48 | 0.76 |
| snRNA | — | — | — | — | — | — | — | 0.34 | — |
| Satellite | 3.61 | 2.95 | 3.10 | 5.08 | 3.88 | 2.28 | 1.75 | 2.36 | 2.59 |
| Unclassified | 4.06 | 4.63 | 7.57 | 3.71 | 4.57 | 6.06 | 3.82 | 1.22 | 2.15 |
| Total | 29.63 | 24.75 | 45.57 | 60.13 | 54.94 | 56.09 | 37.97 | 42.03 | 47.02 |
Note.—GP, genome proportion; snRNA, small noncoding RNA; —, not detected.