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. Author manuscript; available in PMC: 2013 Dec 14.
Published in final edited form as: Biochemistry. 2009 Feb 3;48(4):10.1021/bi801831r. doi: 10.1021/bi801831r

Table 2.

Chain Interfaces Calculated by PISAa

interface chain 1:chain 2 residues area (Å2) H-bonds salt bonds CSSc color
1 dho1(A):dho4(G) 30:30 1082 10 26 0.969 purple
2 atc1(B):atc2(D) 26:26 946 19 8 1.00 blue
(2) atc1(B):atc3(F) 26:26 946 19 8 1.00 cyan
3 atc1(B):dho1(A) 23:22 788 9 7 0.427 green
4 atc1(B):dho4(G) 20:22 768 12 0 0.191 yellow
5 dho1(A):dho5(I) 12:12 389 2 0 0.059 orange
6 dho1(A):atc3(F) 4:5 51 2 0 0.018 red
7b atc1(B):atc* 11:11 114 10 10 0.00 gray
a

The Protein Interfaces, Surfaces, and Assemblies service (PISA) at the European Bioinformatics Institute (http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html) identified six protein interfaces in the DAC dodecamer and one packing contact in the crystal. The six interfaces within the dodecamer are ranked in decreasing order of their buried surface area, which is an approximate measure of the strength of the interaction, and correspondingly colored in descending order of spectral energy (59). The crystal packing contact is colored gray.

b

Crystal packing contact between two dodecamers in the crystal.

c

Complexation significance score.