(i) Disease MOI:	Dominant, Recessive, Multiplicative;
(ii) Prevalence (φ):	0.05, 0.15;
(iii) Genotype Relative Risk (R2):	1.0 (Null), 2.5, 5.0;
(iv) CVF:	0.01, 0.05;
(v) Coverage $v_k^t$ (for all k):	3, 8, 25;
(vi) Control error probability ${\epsilon }_0^t$:	0.001, 0.04;
(vii) Case error probability ${\epsilon }_1^t$:	0.001, 0.04;
(viii) Number of cases:	500;
(ix) Number of controls:	500;
(x) Number of starting points:	200;
(xi) Number of EM steps per starting point:	1000;
(xii) Tolerance ε :	10−5;
(xiii) Number of replicates per vector ((i)–(iv)):	500 (Null), 250 (Alternative).
(xiv) Number of loci:	5, 8;
(xv) Correlation ρ:	0.90.