Table 1. Biochemical Activity of Tested Compounds against PvNMT and Human NMTs a.
Kiapp (μM) |
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Cmpd | R2 | R3 | R4 | R6 | PvNMT | HsNMT1 | HsNMT2 | cLog Pc | LEd | LipEe |
1 | Me | nBu | S-(CH2)2-CN | MeO | 1.73 ± 0.16 | 1.69 ± 0.22 | 11.39 ± 2.11 | 4.9 | 0.36 | 0.9 |
5b | Me | Et | S-(CH2)2-CN | MeO | 3.23 ± 0.19 | 15.63 ± 1.37 | 23.23 ± 2.53 | 3.9 | 0.37 | 1.6 |
6 | Me | H | S-(CH2)2-CN | MeO | > 100 | > 100 | > 100 | 2.5 | ||
7 | H | CO2E | S-(CH2)2-CN | MeO | 4.74 ± 0.24 | 19.43 ± 0.86 | >100 | 3.0 | 0.33 | 2.4 |
t | ||||||||||
8 | H | CO2E | S-(CH2)2-CN | H | 24.42 ± 1.79 | > 100 | > 100 | 2.7 | 0.31 | 1.9 |
t | ||||||||||
9 | Me | CO2E | S-(CH2)2-CN | H | 24.37 ± 0.53 | 10.80 ± 0.91 | 41.53 ± 6.23 | 3.2 | 0.30 | 1.4 |
t | ||||||||||
10 | Et | CO2E | S-(CH2)2-CN | H | 60.63 ± 4.72 | 47.92 ± 7.84 | 94.17 ± 6.23 | 3.8 | 0.26 | 0.5 |
t | ||||||||||
11 | nPr | CO2E | S-(CH2)2-CN | H | > 100 | > 100 | > 100 | 4.3 | ||
t | ||||||||||
12 | Me | nBu | s-(ch2)2-c=ch | MeO | 11.60 ± 1.39 | > 100 | > 100 | 5.4 | 0.31 | −0.5 |
13 | Me | nBu | S-(CH2)3-CN | MeO | 35.23 ± 7.64 | 47.60 ± 3.51 | 46.06 ± 13.04 | 5.3 | 0.26 | −0.8 |
14 | Me | nBu | S-CH2-CN | MeO | > 100 | 4.6 | ||||
15 | Me | nBu | S-(CH2)3-OH | MeO | 17.35 ± 0.84 | > 100 | > 100 | 5.0 | 0.30 | −0.2 |
16 | Me | nBu | S-(CH2)2-Ph | MeO | > 100 | 6.7 | ||||
17 | Me | CO2E | NH-(CH2)-CN | H | >100 | 3.7 | ||||
t | ||||||||||
18b | Me | nBu | S-(CH2)2-CN | H | 2.46 ± 0.16 | > 100 | > 100 | 4.6 | 0.38 | 1.0 |
19b | Me | nBu | S-(CH2)2-CN | Br | 21.55 ± 2.38 | > 100 | > 100 | 5.5 | 0.30 | −0.9 |
20 | H | CO2E | S-(CH2)2-CN | F | 7.77 ± 0.38 | 33.48 ± 9.61 | 37.52 ± 10.69 | 2.9 | 0.33 | 2.2 |
t | ||||||||||
21 | H | CO2E | S-(CH2)2-CN | Me | 6.97 ± 0.54 | 27.49 ± 2.40 | > 100 | 3.2 | 0.33 | 1.9 |
t | ||||||||||
22 | H | CO2E | S-(CH2)2-CN | Cl | 10.39 ± 0.80 | > 100 | > 100 | 3.5 | 0.32 | 1.5 |
t | ||||||||||
23 | H | CO2E | S-(CH2)2-CN | Acetyl | > 100 | 2.0 | ||||
t | ||||||||||
24 | H | CO2E | S-(CH2)2-CN | CH3-CH(OH) | > 100 | 2.8 | ||||
t |
Apparent Ki values of tested compounds on the enzymatic activity of recombinant P. vivax NMT and Homo sapiens NMT isoforms 1 and 2. Each Ki is the mean ± SD from duplicates.
Purchased compound from Interbioscreen Ltd. Purity > 85% based on RP-HPLC/MS analysis.
cLog P values were calculated with ChemDraw for Excel version 12.0.2.
LE: ligand efficiency (PvNMT); LE = −RTln(Kiapp)/N where N is the number of non-hydrogen atoms of the compound.
LipE: lipophilic efficiency (PvNMT); LipE = pIC50 - cLog P.