Table 3.

Network comparison between the 3 B-cell lymphoma GRNs and the (A) TRN and (B) PPN.

(A) Transcriptional regulatory network (TRN)
	Shared genes (%)	Edges GRN	Edges TRN	Shared edges%	p-value
C3Net	7915	6361	22,668	8 (0.125)	0.045
BC3Net	7915	39, 507	22, 668	33 (0.084)	0.176
Aracne	7915	210, 036	22, 668	134 (0.064)	0.923
(B) Protein protein network (PPN)
	Shared genes (%)	Edges GRN	Edges PPN	Shared edges%	p-value
C3Net	7944	6429	100,074	145 (2.226)	0
BC3Net	7944	40,049	100,074	563 (1.406)	0
Aracne	7944	213,841	100,074	2110 (0.987)	0

Here, shared genes and shared edges correspond to the genes and edges that can be found in a GRN and the (A) TRN and (B) PPN.