Table 2. Number of key sting gland genes (out of 11) found with shallow RNA-Seq.
Sting Gland(Nurse vs. Forager) | NOISeq (RPKM) | NOISeq (UQ) | DESeq |
1 million reads | 10 | 10 | 8 |
3 million reads | 11 | 10 | 9 |
6 million reads | 11 | 10 | 9 |
12 million reads | 11 | 10 | 10 |
Sting vs. DT (Nurse) | NOISeq (RPKM) | NOISeq (UQ) | DESeq |
1 million reads | 10 | 11 | 9 |
3 million reads | 11 | 11 | 11 |
6 million reads | 11 | 11 | 11 |
12 million reads | 11 | 11 | 11 |
Sting vs. DT (Forager) | NOISeq (RPKM) | NOISeq (UQ) | DESeq |
1 million reads | 10 | 10 | 7 |
3 million reads | 10 | 10 | 9 |
6 million reads | 10 | 10 | 9 |
12 million reads | 10 | 10 | 9 |
Total Focal Genes | 11 |