Table 1. Quantitative performance results of yeast segmentation algorithms.
Method | %Cells | %Cells | # of Contours | PPV3 | CPU |
Detected1 | Segmented2 | Generated | time4 | ||
CellStat [9] | 73.0% | 10.2% | 9164 | 18.8% | 2382.5 |
CellSerpent [10] | 99.8% | 32.0% | 104122 | 11.3% | 1887.7 |
PombeX | 97.0% | 86.4% | 18125 | 86.9% | 135.7 |
PombeX w/o FP | 94.5% | 70.8% | 19594 | 71.1% | 125.0 |
1 Relative to all cells.
% pixel mismatch compared to gold standard cell contours, relative to all cells.2 Defined as the percentage of cell contours with less than 10
3 Relative to all contours.
CPU@3.40 GHz, 4 GB RAM).4 Average CPU time per image, measured using a regular desktop PC (Windows 7, Matlab R2011a, Intel(R) Core(TM) i7-2600