Table 5.
Results on average elapsed time
| # groups | M Ip | label | M Ip+label | ||||||
|---|---|---|---|---|---|---|---|---|---|
| C = 0 | 1 | 2 | C = 0 | 1 | 2 | C = 0 | 1 | 2 | |
| 2 | 55.5 | 43.5 | 41.5 | 46.2 | 46.9 | 46.2 | 80.8 | 64.6 | 62.6 |
| 4 | 57.9 | 51.9 | 42.8 | 50.6 | 47.7 | 48.0 | 127.7 | 63.8 | 62.5 |
| 8 | 56.9 | 55.8 | 55.6 | 54.3 | 50.5 | 50.8 | 194.9 | 68.2 | 67.1 |
| 10 | 54.2 | 57.4 | 52.5 | 57.1 | 52.2 | 51.8 | 235.1 | 73.0 | 72.8 |
| 15 | 55.6 | 57.2 | 55.2 | 65.2 | 55.5 | 55.1 | 342.5 | 79.8 | 79.2 |
| 20 | 57.8 | 60.4 | 55.2 | 68.1 | 58.2 | 58.3 | 320.8 | 84.6 | 82.9 |
Results on average elapsed time (sec) for an iteration of the cross validation using the contact definition of 3 Å, M Ip, labels representing kinds of amino acids and bases, and the grouping of amino acids with lasso parameter C = 0, 1, and 2.