Table 1.
Enriched motifs in the promoters of co-regulated genes by TORC1 and proteasome. Question marks denote ‘yet to be identified’.
| category | motifs | p-value | TF | consensus |
|---|---|---|---|---|
| Rap + MG132 + (class 1) | GTGGCAAA | 6.4 × 10−16 | Rpn4 | GGTGGCAA |
| GGTGGCAA | 1.2 × 10−13 | Rpn4 | ||
| AGGGG | 1.6 × 10−13 | Msn2/Msn4 | AGGGG | |
| CGCCAC | 1.2 × 10−8 | ? | ? | |
| TTCTAGAA | 4.7 × 10−7 | Hsf1 | TTCNNGAA | |
| CCGCCA | 1.5 × 10−6 | ? | ? | |
| AAGGGAT | 3.6 × 10−5 | Gis1 | TWAGGGAT | |
| Rap + MG132-(class 2) | CTTATC | 1.3 × 10−11 | Gln3 | CTTATC |
| Gat1 | CTTATC | |||
| Rap-MG132-(class 3) | CGCGTC | 4.5 × 10−8 | ? | ? |
| TGACTC | 7.0 × 10−7 | Bas1 | TGACTC | |
| Gcn4 | TGASTCA | |||
| ACGCGT | 1.1 × 10−6 | Mbp1 | ACGCGT | |
| CGCGAA | 3.0 × 10−6 | ? | ? |