Table 2. CD-acquired conformation and thermal stability of mutant telomeric oligonucleotides.
sequence | topology at 20°C | Tm (290 nm) | ΔTm |
---|---|---|---|
wt | hybrid | 61.4 ± 0.2 | - |
C1 | antiparallel | 59.5 ± 0.2 | -1.9 |
C1a | antiparallel/hybrid | 60.7 ± 0.2 | -0.7 |
C1b | antiparallel/hybrid | 60.4 ± 0.2 | -1.0 |
C1c | antiparallel/hybrid | 61.0 ± 0.1 | -0.4 |
C2 | antiparallel/hybrid | 58.2 ± 0.2 | -3.2 |
C2a | hybrid = wt | 59.4 ± 0.3 | -2.0 |
C2b | hybrid = wt | 59.9 ± 0.2 | -1.5 |
C2c | hybrid = wt | 60.1 ± 0.1 | -1.3 |
C3 | hybrid ≠ wt | 63.6 ± 0.2 | +2.2 |
C3a | hybrid = wt | 62.2 ± 0.3 | +0.8 |
C3b | hybrid ≠ wt | 63.4 ± 0.1 | +2.0 |
C3c | hybrid ≠ wt | 62.5 ± 0.3 | +1.1 |
C3d | antiparallel/hybrid | 61.8 ± 0.2 | +0.4 |
CCC1 | antiparallel | 60.8 ± 0.1 | -0.6 |
CCC2 | hybrid ≠ wt | 59.0 ± 0.3 | -2.4 |
CCC3 | antiparallel | 57.8 ± 0.2 | -3.6 |
T3 | hybrid = wt | 60.5 ± 0.1 | -0.9 |
A2T3 | hybrid = wt | 58.1 ± 0.1 | -3.3 |
A1T3 | hybrid = wt | 47.9 ± 0.5 | -13.5 |
Tm with standard deviation values are indicated.