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. 2013 Nov 19;4(6):e00698-13. doi: 10.1128/mBio.00698-13

TABLE 1 .

Deep sequencing results of NalO4-treated and nontreated small RNA librariesa

Categoryb HEK293-NI-NT
HEK293-NI-NalO4
HEK293-SINV-NT
HEK293-SINV-NalO4
Read count Read % Read count Read % Read count Read % Read count Read %
Raw data 21,631,645 34,131,455 20,753,238 28,263,345
Filtered out 92,556 3,589,935 146,674 5,425,669
Unmapped 840,747 7,135,376 1,276,025 5,143,518
Mapped 20,698,342 100.00 23,406,144 100.00 19,330,539 100.00 17,694,158 100.00
hsa miRNAs 18,298,024 88.40 7,325,147 31.30 14,850,144 76.82 4,138,513 23.39
hsa rRNAs 66,614 0.32 1,509,137 6.45 337,226 1.74 850,630 4.81
hsa tRNAs 878,642 4.24 6,260,105 26.75 1,680,819 8.70 5,915,996 33.43
hsa snRNAs 8,956 0.04 13,719 0.06 8,913 0.05 6,996 0.04
hsa snoRNAs 91,453 0.44 93,919 0.40 111,048 0.57 70,898 0.40
hsa miscRNAs 59,911 0.29 36,831 0.16 283,636 1.47 98,472 0.56
Only viral RNA 491 0.00 37 0.00 400,252 2.07 262,916 1.49
Unannotated RNA 1,294,251 6.25 8,167,249 34.89 1,658,501 8.58 6,349,737 35.89
a

HEK293 cells were infected with SINV or not infected (NI) and treated with sodium periodate (NalO4) or not treated with sodium periodate (NT).

b

Abbreviations: hsa, homo sapiens; miscRNAs, miscellaneous RNAs.