Table 1.
Sample # | Sample name | Study | Patient | Clone | Year | Mucoid | Mutator | State 1 | Medium 2 | OD 3 |
---|---|---|---|---|---|---|---|---|---|---|
[1,2] |
Huse_A1 |
Study 1 |
A |
“A” |
~1983 |
No |
N/A |
Early |
SCFSM |
0.4-0.5 |
[3,4] |
Huse_A2 |
Study 1 |
A |
“A” |
~1984 |
No |
N/A |
Early |
SCFSM |
0.4-0.5 |
[5,6] |
Huse_A3.1 (m) |
Study 1 |
A |
“A” |
~1985 |
Yes |
N/A |
Early |
SCFSM |
0.4-0.5 |
[7,8] |
Huse_A3.2 |
Study 1 |
A |
“A” |
~1985 |
No |
N/A |
Early |
SCFSM |
0.4-0.5 |
[9,10] |
Huse_A4 (m) |
Study 1 |
A |
“A” |
~1986 |
Yes |
N/A |
Early |
SCFSM |
0.4-0.5 |
[11,12] |
Huse_B1 |
Study 1 |
B |
“B” |
~1983 |
No |
N/A |
Early |
SCFSM |
0.4-0.5 |
[13,14] |
Huse_B2.1 |
Study 1 |
B |
“B” |
~1987 |
No |
N/A |
Late |
SCFSM |
0.4-0.5 |
[15,16] |
Huse_B2.2 |
Study 1 |
B |
“B” |
~1987 |
No |
N/A |
Late |
SCFSM |
0.4-0.5 |
[17,18] |
Huse_B2.3 (m) |
Study 1 |
B |
“B” |
~1987 |
Yes |
N/A |
Late |
SCFSM |
0.4-0.5 |
[19,20] |
Huse_B3.1 (m) |
Study 1 |
B |
“B” |
~1991 |
Yes |
N/A |
Late |
SCFSM |
0.4-0.5 |
[21,22] |
Huse_B3.2 |
Study 1 |
B |
“B” |
~1991 |
No |
N/A |
Late |
SCFSM |
0.4-0.5 |
[23,24] |
Huse_B3.3 (m) |
Study 1 |
B |
“B” |
~1991 |
Yes |
N/A |
Late |
SCFSM |
0.4-0.5 |
[25,26] |
Huse_Ca1 |
Study 1 |
C |
“Ca” |
~1983 |
No |
N/A |
Early |
SCFSM |
0.4-0.5 |
[27,28] |
Huse_Ca2 (m) |
Study 1 |
C |
“Ca” |
~1983 |
Yes |
N/A |
Early |
SCFSM |
0.4-0.5 |
[29,30] |
Huse_Cb1 (m) |
Study 1 |
C |
“Cb” |
~1987 |
Yes |
N/A |
Early |
SCFSM |
0.4-0.5 |
[31,32] |
Huse_Cb2 |
Study 1 |
C |
“Cb” |
~1987 |
No |
N/A |
Late |
SCFSM |
0.4-0.5 |
[33,34] |
Huse_Cb3 (m) |
Study 1 |
C |
“Cb” |
~1987 |
Yes |
N/A |
Late |
SCFSM |
0.4-0.5 |
[35-36] |
Huse_PA14 |
Study 1 |
N/A |
“PA14” |
N/A |
No |
N/A |
wt |
SCFSM |
0.4-0.5 |
[37-38] |
Huse_PAO1 |
Study 1 |
N/A |
“PAO1” |
N/A |
No |
N/A |
wt |
SCFSM |
0.4-0.5 |
[39-41] |
Yang_PAO1 |
Study 2 |
N/A |
“PAO1” |
N/A |
No |
N/A |
wt |
LB |
0.5 |
[42-47] |
Yang_CF510-2006 |
Study 2 |
N/A |
“WTB” |
N/A |
No |
N/A |
N/A |
LB |
0.5 |
[48-50] |
Yang_B6.0 |
Study 2 |
B6 |
“B6” |
~2005 |
No |
N/A |
Early |
LB |
0.5 |
[51-53] |
Yang_B6.4 |
Study 2 |
B6 |
“B6” |
~2007 |
No |
N/A |
Early |
LB |
0.5 |
[54-56] |
Yang_B12.0 |
Study 2 |
B12 |
“B12” |
~2005 |
No |
N/A |
Early |
LB |
0.5 |
[57-59] |
Yang_B12.4 |
Study 2 |
B12 |
“B12” |
~2007 |
No |
N/A |
Early |
LB |
0.5 |
[60-62] |
Yang_B12.7 |
Study 2 |
B12 |
“B12” |
~2009 |
No |
N/A |
Early |
LB |
0.5 |
[63-65] |
Yang_B38.1 |
Study 2 |
B38 |
“B38” |
~2005 |
No |
N/A |
Early |
LB |
0.5 |
[66-68] |
Yang_B38.2 (m) |
Study 2 |
B38 |
“B38” |
N/A |
Yes |
N/A |
Early |
LB |
0.5 |
[69-71] |
Yang_B38.2 |
Study 2 |
B38 |
“B38” |
~2005 |
No |
N/A |
Early |
LB |
0.5 |
[72-74] |
Yang_B38.6 (m) |
Study 2 |
B38 |
“B38” |
~2006 |
Yes |
N/A |
Early |
LB |
0.5 |
[75-77] |
Yang_CF43-1973 |
Study 2 |
CF43 |
“DK2” |
1973 |
No |
N/A |
Early |
LB |
0.5 |
[78-80] |
Yang_CF66-1973 |
Study 2 |
CF66 |
“DK2” |
1973 |
No |
N/A |
Late |
LB |
0.5 |
[81-83] |
Yang_CF105_1973 |
Study 2 |
CF105 |
“DK2” |
1973 |
No |
N/A |
Early |
LB |
0.5 |
[84-86] |
Yang_CF114_1973 |
Study 2 |
CF114 |
“DK2” |
1973 |
No |
N/A |
Early |
LB |
0.5 |
[87-89] |
Yang_CF30-1979 |
Study 2 |
CF30 |
“DK2” |
1979 |
No |
N/A |
Late |
LB |
0.5 |
[90-92] |
Yang_CF173-1984 |
Study 2 |
CF173 |
”DK2” |
1984 |
No |
N/A |
Late |
LB |
0.5 |
[93-95] |
Yang_CF333-1991 |
Study 2 |
CF333 |
”DK2” |
1991 |
No |
N/A |
Late |
LB |
0.5 |
[96-98] |
Yang_CF66-1992 |
Study 2 |
CF66 |
“DK2” |
1992 |
No |
N/A |
Late |
LB |
0.5 |
[99-101] |
Yang_CF333_1997 |
Study 2 |
CF333 |
“DK2” |
1997 |
No |
N/A |
Late |
LB |
0.5 |
[102-104] |
Yang_CF173-2002 |
Study 2 |
CF173 |
“DK2” |
2002 |
No |
N/A |
Late |
LB |
0.5 |
[105-107] |
Yang_CF243-2002 |
Study 2 |
CF243 |
“DK2” |
2002 |
No |
N/A |
Late |
LB |
0.5 |
[108-110] |
Yang_CF333-2003 |
Study 2 |
CF333 |
“DK2” |
2003 |
No |
N/A |
Late |
LB |
0.5 |
[111-113] |
Yang_CF173-2005 |
Study 2 |
CF173 |
“DK2” |
2005 |
No |
N/A |
Late |
LB |
0.5 |
[114-116] |
Yang_CF333-2005 |
Study 2 |
CF333 |
“DK2” |
2005 |
No |
N/A |
Late |
LB |
0.5 |
[117-119] |
Yang_CF333-2007.1 |
Study 2 |
CF333 |
“DK2” |
2007 |
No |
N/A |
Late |
LB |
0.5 |
[120-122] |
Yang_CF333-2007.2 (m) |
Study 2 |
CF333 |
“DK2” |
2007 |
Yes |
N/A |
Late |
LB |
0.5 |
[123-125] |
Yang_CF333-2007.3 (m) |
Study 2 |
CF333 |
“DK2” |
2007 |
Yes |
N/A |
Late |
LB |
0.5 |
[126-128] |
Yang_CF66-2008 |
Study 2 |
CF66 |
“DK2” |
2008 |
No |
N/A |
Late |
LB |
0.5 |
[129-131] |
SD_CF211-1997 (m) |
Study 5 |
CF211 |
“DK2” |
1997 |
Yes |
N/A |
Late |
LB |
1 |
[132-134] |
SD_CF211-1997 |
Study 5 |
CF211 |
“DK2” |
1997 |
No |
N/A |
Late |
LB |
1 |
[135-137] |
SD_CF211-2006 (m) |
Study 5 |
CF211 |
“DK2” |
2006 |
Yes |
N/A |
Late |
LB |
1 |
[138-140] |
SD_CF211-2006 |
Study 5 |
CF211 |
“DK2” |
2006 |
No |
N/A |
Late |
LB |
1 |
[141-142] |
Lee_CF30-1992 (m) |
Study 3 |
CF30 |
“DK1” |
1973 |
Yes |
No |
Late |
BB |
1 |
[143-144] |
Lee_CF30-1992 |
Study 3 |
CF30 |
“DK1” |
1973 |
No |
No |
Late |
BB |
1 |
[145-146] |
Lee_CF30-2001 (m) |
Study 3 |
CF30 |
“DK1” |
2001 |
Yes |
No |
Late |
BB |
1 |
[147-148] |
Lee_CF30-2001 |
Study 3 |
CF30 |
“DK1” |
2001 |
No |
No |
Late |
BB |
1 |
[149-150] |
Lee_CF46-1988 (m) |
Study 3 |
CF46 |
“DK1” |
1988 |
Yes |
No |
Late |
BB |
1 |
[151-152] |
Lee_CF46-1988 |
Study 3 |
CF46 |
“DK1” |
1988 |
No |
No |
Late |
BB |
1 |
[153-154] |
Lee_CF46-1997 (m) HYP |
Study 3 |
CF46 |
“DK1” |
1997 |
Yes |
Yes |
Late |
BB |
1 |
[155-156] |
Lee_CF46-1997 HYP |
Study 3 |
CF46 |
“DK1” |
1997 |
No |
Yes |
Late |
BB |
1 |
[157-158] |
Lee_CF128-1992 (m) |
Study 3 |
CF128 |
“DK1” |
1992 |
Yes |
No |
Late |
BB |
1 |
[159-160] |
Lee_CF128-1992 HYP |
Study 3 |
CF128 |
“DK1” |
1992 |
No |
Yes |
Late |
BB |
1 |
[161-162] |
Lee_CF128-2002 (m) |
Study 3 |
CF128 |
“DK1” |
2002 |
Yes |
No |
Late |
BB |
1 |
[163-164] |
Lee_CF128-2002 HYP |
Study 3 |
CF128 |
“DK1” |
2002 |
No |
Yes |
Late |
BB |
1 |
[165-167] |
Hob_1998 |
Study 4 |
M |
“M” |
1998 |
No |
No |
Late |
LB |
>3 |
[168–170] |
Hob_1998 (m) |
Study 4 |
M |
“M” |
1998 |
Yes |
No |
Late |
LB |
>3 |
[171-173] |
Hob_1999 |
Study 4 |
M |
“M” |
1999 |
No |
No |
Late |
LB |
>3 |
[174–176] |
Hob_2001 |
Study 4 |
M |
“M” |
2001 |
No |
No |
Late |
LB |
>3 |
[177-179] |
Hob_1999 HYP |
Study 4 |
M |
“M” |
1999 |
No |
Yes |
Late |
LB |
>3 |
[180-182] |
Hob_2001.1 HYP |
Study 4 |
M |
“M” |
2001 |
No |
Yes |
Late |
LB |
>3 |
[183-185] |
Hob_2001.2 HYP |
Study 4 |
M |
“M” |
2001 |
No |
Yes |
Late |
LB |
>3 |
[186-188] | Hob_2001.3 HYP | Study 4 | M | “M” | 2001 | No | Yes | Late | LB | >3 |
1Adaptation state (early or late).
2Growth medium for the experiments: Synthetic Cystic Fibrosis Sputum Medium (SCFSM), Luria-Bertani Broth (LB), or Beef Broth (BB).
3Optical density (OD) at 600 nm during cell harvest.