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. 2013 Sep 23;14:279. doi: 10.1186/1471-2105-14-279

Table 1.

List of samples

Sample # Sample name Study Patient Clone Year Mucoid Mutator State 1 Medium 2 OD 3
[1,2]
Huse_A1
Study 1
A
“A”
~1983
No
N/A
Early
SCFSM
0.4-0.5
[3,4]
Huse_A2
Study 1
A
“A”
~1984
No
N/A
Early
SCFSM
0.4-0.5
[5,6]
Huse_A3.1 (m)
Study 1
A
“A”
~1985
Yes
N/A
Early
SCFSM
0.4-0.5
[7,8]
Huse_A3.2
Study 1
A
“A”
~1985
No
N/A
Early
SCFSM
0.4-0.5
[9,10]
Huse_A4 (m)
Study 1
A
“A”
~1986
Yes
N/A
Early
SCFSM
0.4-0.5
[11,12]
Huse_B1
Study 1
B
“B”
~1983
No
N/A
Early
SCFSM
0.4-0.5
[13,14]
Huse_B2.1
Study 1
B
“B”
~1987
No
N/A
Late
SCFSM
0.4-0.5
[15,16]
Huse_B2.2
Study 1
B
“B”
~1987
No
N/A
Late
SCFSM
0.4-0.5
[17,18]
Huse_B2.3 (m)
Study 1
B
“B”
~1987
Yes
N/A
Late
SCFSM
0.4-0.5
[19,20]
Huse_B3.1 (m)
Study 1
B
“B”
~1991
Yes
N/A
Late
SCFSM
0.4-0.5
[21,22]
Huse_B3.2
Study 1
B
“B”
~1991
No
N/A
Late
SCFSM
0.4-0.5
[23,24]
Huse_B3.3 (m)
Study 1
B
“B”
~1991
Yes
N/A
Late
SCFSM
0.4-0.5
[25,26]
Huse_Ca1
Study 1
C
“Ca”
~1983
No
N/A
Early
SCFSM
0.4-0.5
[27,28]
Huse_Ca2 (m)
Study 1
C
“Ca”
~1983
Yes
N/A
Early
SCFSM
0.4-0.5
[29,30]
Huse_Cb1 (m)
Study 1
C
“Cb”
~1987
Yes
N/A
Early
SCFSM
0.4-0.5
[31,32]
Huse_Cb2
Study 1
C
“Cb”
~1987
No
N/A
Late
SCFSM
0.4-0.5
[33,34]
Huse_Cb3 (m)
Study 1
C
“Cb”
~1987
Yes
N/A
Late
SCFSM
0.4-0.5
[35-36]
Huse_PA14
Study 1
N/A
“PA14”
N/A
No
N/A
wt
SCFSM
0.4-0.5
[37-38]
Huse_PAO1
Study 1
N/A
“PAO1”
N/A
No
N/A
wt
SCFSM
0.4-0.5
[39-41]
Yang_PAO1
Study 2
N/A
“PAO1”
N/A
No
N/A
wt
LB
0.5
[42-47]
Yang_CF510-2006
Study 2
N/A
“WTB”
N/A
No
N/A
N/A
LB
0.5
[48-50]
Yang_B6.0
Study 2
B6
“B6”
~2005
No
N/A
Early
LB
0.5
[51-53]
Yang_B6.4
Study 2
B6
“B6”
~2007
No
N/A
Early
LB
0.5
[54-56]
Yang_B12.0
Study 2
B12
“B12”
~2005
No
N/A
Early
LB
0.5
[57-59]
Yang_B12.4
Study 2
B12
“B12”
~2007
No
N/A
Early
LB
0.5
[60-62]
Yang_B12.7
Study 2
B12
“B12”
~2009
No
N/A
Early
LB
0.5
[63-65]
Yang_B38.1
Study 2
B38
“B38”
~2005
No
N/A
Early
LB
0.5
[66-68]
Yang_B38.2 (m)
Study 2
B38
“B38”
N/A
Yes
N/A
Early
LB
0.5
[69-71]
Yang_B38.2
Study 2
B38
“B38”
~2005
No
N/A
Early
LB
0.5
[72-74]
Yang_B38.6 (m)
Study 2
B38
“B38”
~2006
Yes
N/A
Early
LB
0.5
[75-77]
Yang_CF43-1973
Study 2
CF43
“DK2”
1973
No
N/A
Early
LB
0.5
[78-80]
Yang_CF66-1973
Study 2
CF66
“DK2”
1973
No
N/A
Late
LB
0.5
[81-83]
Yang_CF105_1973
Study 2
CF105
“DK2”
1973
No
N/A
Early
LB
0.5
[84-86]
Yang_CF114_1973
Study 2
CF114
“DK2”
1973
No
N/A
Early
LB
0.5
[87-89]
Yang_CF30-1979
Study 2
CF30
“DK2”
1979
No
N/A
Late
LB
0.5
[90-92]
Yang_CF173-1984
Study 2
CF173
”DK2”
1984
No
N/A
Late
LB
0.5
[93-95]
Yang_CF333-1991
Study 2
CF333
”DK2”
1991
No
N/A
Late
LB
0.5
[96-98]
Yang_CF66-1992
Study 2
CF66
“DK2”
1992
No
N/A
Late
LB
0.5
[99-101]
Yang_CF333_1997
Study 2
CF333
“DK2”
1997
No
N/A
Late
LB
0.5
[102-104]
Yang_CF173-2002
Study 2
CF173
“DK2”
2002
No
N/A
Late
LB
0.5
[105-107]
Yang_CF243-2002
Study 2
CF243
“DK2”
2002
No
N/A
Late
LB
0.5
[108-110]
Yang_CF333-2003
Study 2
CF333
“DK2”
2003
No
N/A
Late
LB
0.5
[111-113]
Yang_CF173-2005
Study 2
CF173
“DK2”
2005
No
N/A
Late
LB
0.5
[114-116]
Yang_CF333-2005
Study 2
CF333
“DK2”
2005
No
N/A
Late
LB
0.5
[117-119]
Yang_CF333-2007.1
Study 2
CF333
“DK2”
2007
No
N/A
Late
LB
0.5
[120-122]
Yang_CF333-2007.2 (m)
Study 2
CF333
“DK2”
2007
Yes
N/A
Late
LB
0.5
[123-125]
Yang_CF333-2007.3 (m)
Study 2
CF333
“DK2”
2007
Yes
N/A
Late
LB
0.5
[126-128]
Yang_CF66-2008
Study 2
CF66
“DK2”
2008
No
N/A
Late
LB
0.5
[129-131]
SD_CF211-1997 (m)
Study 5
CF211
“DK2”
1997
Yes
N/A
Late
LB
1
[132-134]
SD_CF211-1997
Study 5
CF211
“DK2”
1997
No
N/A
Late
LB
1
[135-137]
SD_CF211-2006 (m)
Study 5
CF211
“DK2”
2006
Yes
N/A
Late
LB
1
[138-140]
SD_CF211-2006
Study 5
CF211
“DK2”
2006
No
N/A
Late
LB
1
[141-142]
Lee_CF30-1992 (m)
Study 3
CF30
“DK1”
1973
Yes
No
Late
BB
1
[143-144]
Lee_CF30-1992
Study 3
CF30
“DK1”
1973
No
No
Late
BB
1
[145-146]
Lee_CF30-2001 (m)
Study 3
CF30
“DK1”
2001
Yes
No
Late
BB
1
[147-148]
Lee_CF30-2001
Study 3
CF30
“DK1”
2001
No
No
Late
BB
1
[149-150]
Lee_CF46-1988 (m)
Study 3
CF46
“DK1”
1988
Yes
No
Late
BB
1
[151-152]
Lee_CF46-1988
Study 3
CF46
“DK1”
1988
No
No
Late
BB
1
[153-154]
Lee_CF46-1997 (m) HYP
Study 3
CF46
“DK1”
1997
Yes
Yes
Late
BB
1
[155-156]
Lee_CF46-1997 HYP
Study 3
CF46
“DK1”
1997
No
Yes
Late
BB
1
[157-158]
Lee_CF128-1992 (m)
Study 3
CF128
“DK1”
1992
Yes
No
Late
BB
1
[159-160]
Lee_CF128-1992 HYP
Study 3
CF128
“DK1”
1992
No
Yes
Late
BB
1
[161-162]
Lee_CF128-2002 (m)
Study 3
CF128
“DK1”
2002
Yes
No
Late
BB
1
[163-164]
Lee_CF128-2002 HYP
Study 3
CF128
“DK1”
2002
No
Yes
Late
BB
1
[165-167]
Hob_1998
Study 4
M
“M”
1998
No
No
Late
LB
>3
[168–170]
Hob_1998 (m)
Study 4
M
“M”
1998
Yes
No
Late
LB
>3
[171-173]
Hob_1999
Study 4
M
“M”
1999
No
No
Late
LB
>3
[174–176]
Hob_2001
Study 4
M
“M”
2001
No
No
Late
LB
>3
[177-179]
Hob_1999 HYP
Study 4
M
“M”
1999
No
Yes
Late
LB
>3
[180-182]
Hob_2001.1 HYP
Study 4
M
“M”
2001
No
Yes
Late
LB
>3
[183-185]
Hob_2001.2 HYP
Study 4
M
“M”
2001
No
Yes
Late
LB
>3
[186-188] Hob_2001.3 HYP Study 4 M “M” 2001 No Yes Late LB >3

1Adaptation state (early or late).

2Growth medium for the experiments: Synthetic Cystic Fibrosis Sputum Medium (SCFSM), Luria-Bertani Broth (LB), or Beef Broth (BB).

3Optical density (OD) at 600 nm during cell harvest.