Table 1.
Selected 5’untranslated regions (5'UTRs)
| RNA feature | Start | Stop | Length | Downstream gene | Antisense genes | cis -regulatory element | NPKM value* |
|---|---|---|---|---|---|---|---|
| BLi_r0085 |
210580 |
210926 |
347 |
thrZ |
|
T-box |
1966 |
| BLi_r0356 |
542296 |
542520 |
225 |
BLi00536 |
|
ydaO-yuaA leader |
1368 |
| BLi_r0498 |
712264 |
712587 |
324 |
yybP |
|
yybP-ykoY leader |
1144 |
| BLi_r0691 |
942026 |
942290 |
306 |
thiC |
|
TPP |
5030 |
| BLi_r0744 |
998913 |
999033 |
121 |
glpD |
|
|
5693 |
| BLi_r0943 |
1207762 |
1207542 |
180 |
yitJ |
|
SAM |
2782 |
| BLi_r0982 |
1243825 |
1243498 |
328 |
trpS |
|
T-box |
865 |
| BLi_r0983 |
1244045 |
1244232 |
188 |
oppA |
|
|
1465 |
| BLi_r1011 |
1271178 |
1271391 |
255 |
tenA |
|
TPP |
9963 |
| BLi_r1028 |
1291984 |
1292289 |
306 |
metI |
|
SAM |
3605 |
| BLi_r1168 |
1487545 |
1487279 |
226 |
mtnK |
|
SAM |
2207 |
| BLi_r1196 |
1510226 |
1511237 |
1012 |
BLi05023 |
BLi01539, BLi01540 |
|
651 |
| BLi_r1485 |
1973018 |
1973209 |
192 |
BLi02027 |
|
|
1035 |
| BLi_r1609 |
2118173 |
2117083 |
1091 |
gltA |
gltC |
|
34 |
| BLi_r1634 |
2146236 |
2145933 |
304 |
expZ |
|
|
1225 |
| BLi_r1709 |
2204969 |
2205111 |
143 |
dhaS |
|
|
2816 |
| BLi_r1801 |
2295779 |
2295571 |
168 |
xpt |
|
Purine |
1540 |
| BLi_r1835 |
2356768 |
2356478 |
291 |
hbs |
|
|
3478 |
| BLi_r1850 |
2382265 |
2381914 |
352 |
ribU |
|
FMN |
2367 |
| BLi_r1871 |
2409288 |
2409010 |
238 |
ribD |
|
FMN |
2512 |
| BLi_r2045 |
2616129 |
2615830 |
300 |
glyQ |
|
T-box |
787 |
| BLi_r2142 |
2742406 |
2742106 |
301 |
yrzI |
|
|
860 |
| BLi_r2241 |
2878256 |
2877902 |
313 |
lysC |
|
Lysine |
751 |
| BLi_r2286 |
2949768 |
2949565 |
204 |
citZ |
|
|
1563 |
| BLi_r2389 |
3060789 |
3060456 |
292 |
leuS |
|
T-box |
998 |
| BLi_r2510 |
3188213 |
3185988 |
2226 |
kapD |
yuxJ, pbpD |
|
13 |
| BLi_r2628 |
3302655 |
3302393 |
221 |
metN2 |
|
SAM |
2661 |
| BLi_r3184 |
4014316 |
4014539 |
224 |
yxjG |
|
SAM |
5296 |
| BLi_r3195 |
4037045 |
4036819 |
185 |
BLi04205 |
|
TPP |
9303 |
| BLi_r3196 | 4037110 | 4037236 | 127 | BLi04206 | 2693 |
*(pooled RNA-Seq data).