Table 2.
Selected 3’untranslated regions (3'UTRs)
| RNA feature | Start | Stop | Length | Upstream gene | Antisense genes | NPKM value* |
|---|---|---|---|---|---|---|
| BLi_r0075 |
198675 |
198433 |
243 |
citM |
|
127 |
| BLi_r0671 |
919040 |
918595 |
446 |
ygzB |
perR1 |
50 |
| BLi_r0688 |
938151 |
938591 |
441 |
BLi00936 |
|
496 |
| BLi_r0817 |
1054694 |
1054523 |
172 |
msmX |
BLi01051 |
75 |
| BLi_r0859 |
1099760 |
1099445 |
316 |
ynzH |
yhfE |
2310 |
| BLi_r0949 |
1209837 |
1210136 |
300 |
BLi01196 |
|
188 |
| BLi_r1013 |
1278149 |
1277370 |
780 |
cotZ |
fabI, cotO |
116 |
| BLi_r1145 |
1465905 |
1468238 |
2334 |
ykoM |
ykoU, ykoV |
264 |
| BLi_r1333 |
1655028 |
1654895 |
134 |
ylaL |
|
195 |
| BLi_r1357 |
1680492 |
1679988 |
505 |
ylbP |
gerR |
62 |
| BLi_r1521 |
2008172 |
2008031 |
142 |
BLi02067 |
|
224 |
| BLi_r1720 |
2216049 |
2215342 |
708 |
odhB |
yocS |
41 |
| BLi_r1750 |
2244661 |
2244519 |
143 |
yodL |
yoyE |
16 |
| BLi_r1797 |
2291386 |
2291184 |
203 |
ypbQ |
|
268 |
| BLi_r1927 |
2463046 |
2465026 |
1981 |
BLi02544 |
BLi02545,ymaC |
213 |
| BLi_r1985 |
2537707 |
2537586 |
122 |
mntR |
|
151 |
| BLi_r1995 |
2550986 |
2550862 |
125 |
tasA |
|
482 |
| BLi_r2041 |
2606579 |
2606461 |
119 |
cccA |
|
431 |
| BLi_r2067 |
2662102 |
2661914 |
189 |
BLi02768 |
yrhD |
87 |
| BLi_r2141 |
2741955 |
2741415 |
541 |
yrzI |
|
348 |
| BLi_r2152 |
2754987 |
2754859 |
129 |
yrzB |
|
140 |
| BLi_r2178 |
2787395 |
2787201 |
195 |
yrbF |
|
1520 |
| BLi_r2292 |
2952407 |
2952263 |
145 |
pyk |
|
520 |
| BLi_r2582 |
3255915 |
3256420 |
506 |
yutI |
yuxL |
324 |
| BLi_r2620 |
3292613 |
3292481 |
133 |
sufB |
|
405 |
| BLi_r2654 |
3332662 |
3328698 |
3965 |
liaR |
gerAA, gerAB, gerAC, BLi03491 |
11 |
| BLi_r2700 |
3398622 |
3398373 |
250 |
copA |
|
166 |
| BLi_r2729 |
3427607 |
3428159 |
553 |
BLi05033 |
|
345 |
| BLi_r2752 |
3464447 |
3464713 |
267 |
BLi03635 |
|
286 |
| BLi_r2855 | 3591778 | 3591637 | 142 | cccB | 80 |
*(pooled RNA-Seq data).