Acquisition |
In vitro process no animals are involved |
In vivo process -animals are involved |
In vitro process no animals are involved |
All the toxins don't inhibit enzymatic activity or not substrate of enzyme |
Difficult to obtain antibodies against targets that are non-immunogenic or toxic |
Possible to obtain aptamers against targets that are non-immunogenic or toxic |
Manipulation is not possible Physiological conditions obligatory |
Manipulation of selection hardly or not possible Physiological conditions obligatory |
Manipulate selection to obtain binding and kinetic properties desirable for specific assays Non-physiological conditions acceptable |
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Difficult to expose different epitopes of the same target for selection Identification laborious the immunogen must be the major fraction in the immunization reagent |
Expose different epitopes of the same target for selection Identification easy and rapid process performed on automated platform the target used for selection can be a small portion in the target preparation |
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Stability |
Increased by modifications |
Cannot be increased by modification |
Increased by modifications |
Loss activity over time Narrow stability in terms of pH, ionic strength and temperature |
Relatively stable over time Narrow stability in terms of pH, ionic strength and temperature |
Relatively stable over time Stability over a wide range of pH, ionic strength and temperature |
Unstable at room temperature |
Unstable at room temperature |
Long room temperature shelf lives |
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Specificity and selectivity |
Less selective and specific Can be engineered |
Binding constants for target species comparable with aptamers |
Binding constants for target species comparable with antibodies |
|
Modifications |
Can be engineered |
Biological and hardly engineered |
Chemically easy to engineer Side specific attachment |
Efficient and exact modification
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of reporter molecule
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-
of spacers
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of functional groups
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Homogeneous product |
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Denaturation |
Enzyme accelerates the reaction and does not consume |
Mild conditions needed to prevent irreversible denaturation |
Regeneration after denaturation possible |
Sometimes difficult to separate from antibody-target-complex |
Easy to separate from aptamer-target-complex |
|
Sensors |
Immobilization at defined densities and locations difficult |
Immobilization at defined densities and locations sometimes difficult |
Immobilization at defined densities at precise locations on solid surfaces (microarrays) |
Immobilization can denature enzyme |
Molecular recognition functionalities hardly possible |
Conformational changes on binding providing molecular-recognition functionalities Irreversible |
Irreversible cross-linking usually not possible |
cross-linking with target protein possible-second legand for detection not needed |