Table 1. Strains used in this study.
| Strain | Genotype1 | Source |
|---|---|---|
| TR10000 | Wild-type S. enterica (serovar Typhimurium) LT2 | Lab collection |
| TT25620 | purH887::Tn10, tetA101::Kan(TcSKnR) DEL(Fels-2 Gifsy-1 Gifsy-2) sulA46::Spc lexA34::Rif(sw)/pSIM5(CmR) | This report |
| TT25621 | purH887::Tn10, tetA101::Kan(TcSKnR) DEL(Fels-2 Gifsy-1 Gifsy-2) sulA46::Spc lexA34::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT25671 | purH887::Tn10, tetA101::Kan(TcSKnR) DEL(Fels-2 Gifsy-1 Gifsy-2) sulA46::Spc lexA33:(Rif lexA3IND)/pSIM5(CmR) | This report |
| TT25672 | purH887::Tn10, tetA101::Kan(TcSKnR) DEL(Fels-2 Gifsy-1 Gifsy-2) sulA46::Spc lexA33:(Rif lexA3IND) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26376 | zja9229::tetRA(sw); tetA101::Kan (TcSKnR)/pSIM5(CmR) | This report |
| TT26377 | metA2382::tetRA(sw); tetA101::Kan (TcSKnR)/pSIM5(CmR) | This report |
| TT26379 | thrA537::tetRA(sw); tetA101::Kan (TcSKnR)/pSIM5(CmR) | This report |
| TT26380 | zja9229::tetRA(sw); tetA101::Kan (TcSKnR) rrnE::GntR(sw)/pSIM5(CmR) | This report |
| TT26381 | metA2382::tetRA(sw); tetA101::Kan (TcSKnR) rrnE::GntR(sw)/pSIM5(CmR) | This report |
| TT26382 | thrA537::tetRA(sw); tetA101::Kan (TcSKnR) rrnE::GntR (sw)/pSIM5(CmR) | This report |
| TT26402 | thrA537::tetRA(sw); tetA101::Kan (TcSKnR) rrnH::Spc (sw)/pSIM5(CmR) | This report |
| TT26403 | thrA537::tetRA(sw); tetA101::Kan (TcSKnR) rrnH::Spc(sw) rrnE::GntR(sw)/pSIM5(CmR) | This report |
| TT26404 | metA2382::tetRA(sw); tetA101::Kan (TcSKnR) rrnH::Spc(sw)/pSIM5(CmR) | This report |
| TT26405 | metA2382::tetRA(sw); tetA101::Kan (TcSKnR) rrnE::Gnt(sw) rrnH::Spc(sw)/pSIM5(CmR) | This report |
| TT26406 | zja9229::tetRA(sw); tetA101::Kan (TcSKnR) rrnH::Spc(sw)/pSIM5(CmR) | This report |
| TT26407 | zja9229::tetRA(sw); tetA101::Kan (TcSKnR) rrnE::Gnt(sw) rrnH::Spc(sw)/pSIM5(CmR) | This report |
| TT26438 | purH2411::tetAR; tetA101::Kan(TcSKnR)/pSIM5(CmR) | This report |
| TT26439 | purD2412::tetAR; tetA101::Kan(TcSKnR)/pSIM5(CmR) | This report |
| TT26441 | purD2412::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif/pSIM5(CmR) | This report |
| TT26442 | purH2411::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif/pSIM5(CmR) | This report |
| TT26443 | purD2412::tetAR; tetA101::Kan(kanR) ruvC4::Rif(sw)/pSIM5(CmR) | This report |
| TT26444 | purH2411::tetAR; tetA101::Kan(TcSKnR) ruvC4::Rif(sw)/pSIM5(CmR) | This report |
| TT26445 | purD2412::tetAR; tetA101::Kan(TcSKnR) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26446 | purD2412::tetAR; tetA101::Kan(TcSKnR) recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26461 | purH2411::tetAR; tetA101::Kan(TcSKnR) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26462 | purH2411::tetAR; tetA101::Kan(TcSKnR) recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26463 | purH2411::tetAR; tetA101::Kan(TcSKnR) recB10 his646(del:OGD) pro-47(del:AB)/pSIM5(CmR) | This report |
| TT26464 | purD2412::tetAR; tetA101::Kan(TcSKnR) recB10 his646(del:OGD) pro-47(del:AB)/pSIM5(CmR) | This report |
| TT26465 | purH2411::tetAR; tetA101::Kan(TcSKnR) DEL1742(argA-recB)/pSIM5(CmR) | This report |
| TT26466 | purD2412::tetAR; tetA101::Kan(TcSKnR) DEL1742(argA-recB)/pSIM5(CmR) | This report |
| TT26467 | purH2411::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif recB10 his646(del:OGD) pro-47(del:AB)/pSIM5(CmR) | This report |
| TT26468 | purD2412::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif recB10 his646(del:OGD) pro-47(del:AB)/pSIM5(CmR) | This report |
| TT26469 | purH2411::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif DEL1742(argA-recB)/pSIM5(CmR) | This report |
| TT26470 | purD2412::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif DEL1742(argA-recB)/pSIM5(CmR) | This report |
| TT26498 | purH2411::tetAR; tetA101::Kan(TcSKnR) ruvAB7::Spc(sw)/pSIM5(CmR) | This report |
| TT26500 | purH2411::tetAR; tetA101::Kan(TcSKnR) recN655::Spc(sw)/pSIM5(CmR) | This report |
| TT26502 | purD2412::tetAR; tetA101::Kan(TcSKnR) recN655::Spc(sw)/pSIM5(CmR) | This report |
| TT26507 | purH2411::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw)/pSIM5(CmR) | This report |
| TT26508 | purD2412::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw)/pSIM5(CmR) | This report |
| TT26522 | purH2411::tetAR; tetA101::Kan(TcSKnR) ruvAB7::Spc(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26528 | purD2412::tetAR; tetA101::Kan(kanR) ruvAB7::Spc(sw)/pSIM5(CmR) | This report |
| TT26530 | purD2412::tetAR; tetA101::Kan(KanR) ruvAB7::Spc(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26532 | purD2412::tetAR; tetA101::Kan(TcSKnR) DELmutS281/pSIM5(CmR) | This report |
| TT26534 | purD2412::tetAR; tetA101::Kan(kanR) ruvC4::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26536 | purH2411::tetAR; tetA101::Kan(TcSKnR) ruvC4::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26537 | purH2411::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw)/pSIM5(CmR) | This report |
| TT26538 | purD2412::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw)/pSIM5(CmR) | This report |
| TT26540 | purH2411::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26542 | purD2412::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26545 | purH2411::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26546 | purD2412::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26477 | pyrD2828::tetAR; tetA101::Kan(TcSKnR)/pSIM5(CmR) | This report |
| TT26479 | pyrD2828::tetAR; tetA101::Kan(TcSKnR) recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26551 | purH2411::tetAR; tetA101::Kan(TcSKnR) rrnE::GntR(sw)/pSIM5(CmR) | This report |
| TT26552 | purH2411::tetAR; tetA101::Kan(TcSKnR) rrnE::GntR(sw) rrnH::Spc(sw)/pSIM5(CmR) | This report |
| TT26553 | purD2412::tetAR; tetA101::Kan(TcSKnR) rrnE::GntR(sw) rrnH::Spc(sw)/pSIM5(CmR) | This report |
| TT26556 | purH2411::tetAR; tetA101::Kan(TcSKnR) recN655::Spc(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26557 | purD2412::tetAR; tetA101::Kan(TcSKnR) recN655::Spc(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26559 | purH2411::tetAR; tetA101::Kan(TcSKnR) rrnH::Spc(sw)/pSIM5(CmR) | This report |
| TT26563 | purD2412::tetAR; tetA101::Kan(TcSKnR) rrnH::Spc(sw)/pSIM5(CmR) | This report |
| TT26567 | purH2411::tetAR; tetA101::Kan(TcSKnR) DEL1742(argA-recB) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26569 | purD2412::tetAR; tetA101::Kan(TcSKnR) DEL1742(argA-recB) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26571 | purH2411::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif DEL1742(argA-recB) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26573 | purD2412::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif DEL1742(argA-recB) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26578 | purD2412::tetAR; tetA101::Kan(TcSKnR) DEL(Fels-2) leuA414(UAG) sbcB1 recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26581 | purD2412::tetAR; tetA101::Kan(TcSKnR) sbcB::Zeo(sw)/pSIM5(CmR) | This report |
| TT26584 | purH2411::tetAR; tetA101::Kan(TcSKnR) sbcCD::Gnt(sw) recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26587 | purD2412::tetAR; tetA101::Kan(TcSKnR) sbcCD::Gnt(sw) recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26589 | purH2411::tetAR; tetA101::Kan(TcSKnR) recO656::GntR(sw)/pSIM5(CmR) | This report |
| TT26591 | purH2411::tetAR; tetA101::Kan(TcSKnR) recO656::GntR(sw) recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26593 | purD2412::tetAR; tetA101::Kan(TcSKnR) recO656::GntR(sw)/pSIM5(CmR) | This report |
| TT26595 | purD2412::tetAR; tetA101::Kan(TcSKnR) recO656::GntR(sw) recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26596 | purH2411::tetAR; tetA101::Kan(TcSKnR) sbcCD::Gnt(sw)/pSIM5(CmR) | This report |
| TT26597 | purD2412::tetAR; tetA101::Kan(TcSKnR) rrnE::GntR(sw)/pSIM5(CmR) | This report |
| TT26603 | purH2411::tetAR; tetA101::Kan(TcSKnR) recQ::Spc(sw) recA651::Rif(sw)/pSIM5(CmR) | This report |
| TT26605 | pyrD2828::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC6::Spc(sw)/pSIM5(CmR) | This report |
| TT26607 | purD2412::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw) recF521::Tn5d-Rif DEL1742(argA-recB)/pSIM5(CmR) | This report |
| TT26613 | purD2412::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26615 | purH2411::tetAR; tetA101::Kan(TcSKnR) recF521::Tn5d-Rif recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26618 | purD2412::tetAR; tetA101::Kan(TcSKnR) DEL(Fels-2) leuA414(UAG) sbcB1/pSIM5(CmR) | This report |
| TT26622 | purH2411::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw) DEL1742(argA-recB)/pSIM5(CmR) | This report |
| TT26625 | purD2412::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw) DEL1742(argA-recB)/pSIM5(CmR) | This report |
| TT26628 | purH2411::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw) recF521::Tn5d-Rif DEL1742(argA-recB)/pSIM5(CmR) | This report |
| TT26632 | purH2411::tetAR; tetA101::Kan(TcSKnR) recJ657::Rif(sw)/pSIM5(CmR) | This report |
| TT26634 | purH2411::tetAR; tetA101::Kan(TcSKnR) recJ657::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26636 | purD2412::tetAR; tetA101::Kan(TcSKnR) recJ657::Rif(sw)/pSIM5(CmR) | This report |
| TT26638 | purD2412::tetAR; tetA101::Kan(TcSKnR) recJ657::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26640 | purH2411::tetAR; tetA101::Kan(TcSKnR) ligB::Rif(sw)/pSIM5(CmR) | This report |
| TT26642 | purH2411::tetAR; tetA101::Kan(TcSKnR) ligB::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26644 | purD2412::tetAR; tetA101::Kan(TcSKnR) ligB::Rif(sw)/pSIM5(CmR) | This report |
| TT26646 | purD2412::tetAR; tetA101::Kan(TcSKnR) ligB::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26657 | purD2412::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw) recF521::Tn5d-Rif/pSIM5(CmR) | This report |
| TT26660 | purH2411::tetAR; tetA101::Kan(TcSKnR) recG646::Rif(sw) ruvC4::Spc(sw) recF521::Tn5d-Rif/pSIM5(CmR) | This report |
| TT26806 | purD2412::tetAR; tetA101::Kan(TcSKnR) DELmutS281 recA650::Gnt(sw)/pSIM5(CmR) | This report |
| TT26833 | pyrD2828::tetAR; tetA101::Kan(TcSKnR) ruvC6::Spc(sw) recG646::Rif(sw) recA650::Gnt(sw)/pSIM5(CmR) | This report |
“sw” designates alleles in which the normal sequence was replaced by a drug resistance determinant. “ tetA101::Kan (TcSKnR)“ refers to a kanamycin resistance determinant inserted into the middle of the tetA gene, rendering the strain sensitive to tetracycline and resistant to kanamycin. The “pSIM5(CmR)” plasmid carries the recombination genes (red) of phage lambda (Court et al. 2002).