Skip to main content
. Author manuscript; available in PMC: 2015 Jan 1.
Published in final edited form as: Gen Comp Endocrinol. 2013 Oct 19;195:10.1016/j.ygcen.2013.10.003. doi: 10.1016/j.ygcen.2013.10.003

Table 1.

Putative Calanus finmarchicus amine biosynthetic enzyme-encoding transcripts and proteins identified via in silico transcriptome mining

Query protein Calanus transcript/protein identifications
Transcripts Proteins
Trinity ID Number Name E-value Length* Name Length
Tryptophan-phenylalanine hydroxylase1,3,4 comp34563_c3_seq1 calfi-tph 2.9e-175 1531 Calfi-TPH 443
Tyrosine hydroxylase1 comp541083_c3_seq1 calfi-th 5.1e-139 1932 Calfi-TH 516
DOPA decarboxylase1,4 comp374436_c0_seq5 calfi-ddc 1.7e-168 1560 Calfi-DDC 487
Histidine decarboxylase2 comp175390_c0_seq2 calfi-hdc 2.3e-230 2659 Calfi-HDC 724
Tyrosine decarboxylase3 comp374436_c0_seq1 calfi-tdc 6.7e-154 2127 Calfi-TDC 617
Tyramine β-hydroxylase3 comp975856_c0_seq1 calfi-tβh 4.1e-110 2122 Calfi-TβH 672
Tryptophan hydroxylase4 comp441733_c0_seq2 calfi-trh 2.8e-133 1976 Calfi-TRH 541
*

Length in nucleotides

Length in amino acids

1

Dopamine biosynthesis

2

Histamine biosynthesis

3

Octopamine biosynthesis

4

Serotonin biosynthesis