Table 3.
RS number | Chrom | Physical position | MAF | G/I | A1 | A2 | R2 | Trait | SNP main effect | SNP-loop interaction effect | Nearby genes | SNPs per locus | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Beta | SE | Adjusted P-value | Beta | SE | Adjusted P-value | |||||||||||
rs3790481 | 1 | 68,723,493 | 0.06 | I | C | A | 0.83 | DBP | 0.86 | 0.96 | 3.73 · 10−1 | −31.62 | 6.47 | 2.93 · 10−6 | DEPDC1 | 16 |
rs6721026 | 2 | 200,955,742 | 0.04 | I | A | G | 0.79 | DBP | −0.23 | 1.19 | 8.45 · 10−1 | −25.38 | 5.34 | 5.29 · 10−6 | SPATS2L | 2 |
rs3020401 | 6 | 152,324,737 | 0.35 | I | A | G | 0.99 | SBP | −0.43 | 0.75 | 5.64 · 10−1 | 22.77 | 3.66 | 9.51 · 10−6 | ESR1 | 2 |
rs10764387 | 10 | 23,457,184 | 0.14 | I | C | A | 0.92 | DBP | −0.49 | 0.61 | 4.23 · 10−1 | 13.43 | 2.84 | 6.15 · 10−6 | PIP4K2A-ARMC3- | 17 |
MSRB2-PTF1A | 17 | |||||||||||||||
rs12303986 | 12 | 130,314,492 | 0.03 | G | G | A | NA | DBP | −3.04 | 1.20 | 1.11 · 10−2 | 33.16 | 6.82 | 3.28 · 10−6 | GPR133-SFSWAP | 2 |
rs6012061 | 20 | 44,940,236 | 0.04 | I | G | A | 0.69 | DBP | 2.06 | 1.30 | 1.12 · 10−1 | −27.26 | 5.66 | 4.06 · 10−6 | RIT2-EYA2 | 12 |
Bolded genes represent loci where SNPs are intragenic. A1, allele 1; A2, allele 2; beta, beta coefficient; Chrom, chromosome; DBP, diastolic blood pressure; G/I, genotyped vs. imputed SNP; MAF, minor allele frequency; SBP, systolic blood pressure; SE, standard error of the beta coefficient; SNP, single nucleotide polymorphism.